| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1527 |
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| Symbol | |
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| ID | 5386652 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1776767 |
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| End bp | 1778053 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640864509 |
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| Product | carbohydrate ABC transporter periplasmic-binding protein |
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| Protein accession | YP_001400505 |
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| Protein GI | 153950245 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTAGAAA AAATGAAGAA TACCCTGATT TCATTGGCAA TTGCCTCCAG TTGTGTGGTG
TTTACTGGCT GTGACAATGA TACGGCATCG GCTAAAAATG AAAAACAGGA CATCACGCTT
TGGATAGCGC CGAACAATGT CCAAGAGGCA TTCTGGAGCG AAGTGGTTGG GGAGTGGAAT
AAACAACCAG ATAAAAAGAA AGTCGTCTTC TCAACGATCC CGGCAGCGGG CAGCTCTGAA
GAGGCGATAA TGAATGCGAT TGCTTCTGAT CGCGCACCTG ATATCTCAGA AAATATTTTT
ACCGGCTTTG GTTCTCAGCT TGCTGACTTA GGGCAGGTCG TTGATCTCTC GACGCTGGAT
GGCTATGAAA ACTTAATTAG TACCCGTCAG ATGACGGATA TTATGGATAA TTGGCGCTAT
AACGGAAAAA ACTACATCCT GCCGATTTAT ATGAACCCGG TACTCTTTTG GTGGCGTGGC
GATTTATTAA AAGAGCAGGG CTTTAGCGAG GTGCCAAAAA CGTATGACGA GGTTTACGCA
CTCTCCGAAA AATACACCAT TCCAGACAAA CGTTATGCGA TACAAGCTAC TTCTGGCCGT
AACTGGTGGG ACCGTTGGTT TGATTTTATT GCCCTCTATT ATGCCCAAAG TGATGGCAAG
CCTTATATCG CCAATCAGCA AGCCAGCTAT GATAACCAGG CCGGTCGTGA CGTTCTGGAC
TTTATGCACA CACTCTTTTC AAAAAAATGG ACCCTTTATG ATTTTGGCCA GGATGATCCA
TTAGTCACCG GTAAAGTATT GGGCGCAGTA CGCGGTCCTT GGGATATTAG CCGCTACCAA
CAACAATATC CGGAAATTTT AAAGCACATA AAAATGGGGC CGATGCTGGT TAAAGAGCAG
CAAGATAAAC CACATACTTT CGCCGATGGT AAAGGACTGG TGCTGTTTAG CCATTCAAAG
GTTAAACCCG AGGCGTGGGA GTTTATCCAG TGGGTATTCA GCCAGCCCAA ATTCGATAAA
CGTTGGATGG AATTGACCGG TATGCCACCC GCCAGGGCAG ATTTGCTCAC CAATCCTTTC
TTTGCCGAAT ATTATCAGGA ACACCCGTAT GCCGCGGCCT ACGCTGAATA TGTCAACGTG
GCGATACCTC CGGTTTCCAG TGGTGAAACG GTGGAAATTC AACGCAGCAT GACACAAATG
ATTGAGAAGA CCGCGTTTAA TACTGCAACG CCTGATGAAG CATTGCAACA GTCAATAAAA
GAAGTGAACG CGATTTTAAA GCCCTAA
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| Protein sequence | MLEKMKNTLI SLAIASSCVV FTGCDNDTAS AKNEKQDITL WIAPNNVQEA FWSEVVGEWN
KQPDKKKVVF STIPAAGSSE EAIMNAIASD RAPDISENIF TGFGSQLADL GQVVDLSTLD
GYENLISTRQ MTDIMDNWRY NGKNYILPIY MNPVLFWWRG DLLKEQGFSE VPKTYDEVYA
LSEKYTIPDK RYAIQATSGR NWWDRWFDFI ALYYAQSDGK PYIANQQASY DNQAGRDVLD
FMHTLFSKKW TLYDFGQDDP LVTGKVLGAV RGPWDISRYQ QQYPEILKHI KMGPMLVKEQ
QDKPHTFADG KGLVLFSHSK VKPEAWEFIQ WVFSQPKFDK RWMELTGMPP ARADLLTNPF
FAEYYQEHPY AAAYAEYVNV AIPPVSSGET VEIQRSMTQM IEKTAFNTAT PDEALQQSIK
EVNAILKP
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