| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1374 |
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| Symbol | |
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| ID | 5387806 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | + |
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| Start bp | 1613591 |
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| End bp | 1616341 |
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| Gene Length | 2751 bp |
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| Protein Length | 916 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640864356 |
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| Product | Rhs element Vgr protein |
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| Protein accession | YP_001400353 |
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| Protein GI | 153949042 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3501] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR01646] Rhs element Vgr protein
[TIGR03361] type VI secretion system Vgr family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTATC TATTGGGTGA GCCTGCGCTG GTACTGTCTA AGTTGGAAGG CGAGGAAGCT
TTTTCGACTT TATATTCTTA TACTATTACG GCAAAGACAC CGGCTAATCC ATTAATTCCT
TGGCAAGCGG CTTCAAATGT CGATCTCAAA TCCTTAATTG GTAAAGAGAT GACGATTGAA
ATGGAACTGG ACGGCAACGG CCTGGGTGAT GTGAGAAGTG TAGGTAAAGG CACGCGTGAA
ATTACGGGGC TGGTTGAGAG AGCCAGATAC ATTGGTCGAG ATGCCAATCA GGCCATATTT
GAGATCACTA TTAAGCCTTG GTTCTACCTG GCTAATTTAA CCTCTGACTT TAAAATTTAT
CAAAATAAAA ATGTCGTTGA TATTATAGAG GAAGTGTTCT CAGACTATAA TTTTCCGTTT
GAGAAACGGT TGGCTACAAC CTATCCGATA TTAGATTTTC AGGTTCAGTA CGGTGAAACC
GACTTTAATT TCCTTCAGCG TTTGATGGAA GAGTGGGGTA TTTACTGGTT CTTTGAGCAT
CAGGATCATA AACAAAAATT AATTCTTGTG GATCATGTCG GTGCGCATAA ACGCTCGTTC
AGTACCGCCT ACCATGCCAT TGAGTACTTG TCAGATGAGC CTAAAGCGGG CGAAGAGTAC
ATCACACAAT TCCAGACTCA GGAAACCTTG ACGAGTGGGA CCTGGGTCAC CAACGATTAT
GACTTCACGA AATCCCGTGC CGATATTCTG GCAATGGACA GTAAACCGCG TAAAACCAGC
TTTAACGATC TCGAGATTTA TCACTGGCCA GGGGATTATG ATCAGCCAGA TATTGGTGAG
CACCTTTCAC GCGTGCGTAT CGAAGAACGT GGTGCTCTGG GTTCGCGGGC GGTCGGTTCT
GGTCAACTGC GCGGGATAGT TTGTGGTGCT AACTTCGAGC TGAAAGGGTT CCCCGTTGAT
AAAGCGAATC GGGAATACAT GATTATCTCC AGCCGTTTGA CGGTGGCTGA AGTTGATCAA
CTGTCTGGCG GTGAGGATGC GTTTAGTTGC GAGAGTTCTT TCACGGTTCA GCCGACGACC
AAAATCTATC GTCACCCACA GGTGACACCA AAACCGAAAA CCAATGGGCC GCAAAACGCC
ATTATTGTGG GGCCACCGGG TGAAGAGATT TGGACCGATG AATATGGCCG CGTAAAAGTG
CGTTTCGTTT GGGATCGCTA TGGCACAAAC AGCGAGTCAG ACTCTTGCTG GCTACGTGTT
AGCCAGGCTT GGGCAGGTAA CAGCTTTGGT GGGATCTATA TTCCACGCAT TGGTCAGGAA
GTCATTGTTG ACTGTATTAA CGGCGATCCT GACCGGCCAA TGGTGATGGG CAGCCTTTAT
AATAATGTGA CGCGTCCCCC TTGGGACCTG CCTGCCAATG CGACGCAAAG TGGCATGGTC
AGTCGTACTG TTGGCGGCGG GTTAACCAAC TATAACGGCG TTCGTTTTGA AGATAAATCG
GGGCTGGAGC AGTACTGGGA ACAGGCCGAG CGCGATATGT CGCGTTTGAC TAAAAATAAT
GAAACGCAAA TTATCGGTGC CGATTCGGTC CTGAATGTTG GGGCCAACCG AAGTGAAGTT
GTCGGGGCCA ATTATAACCA AGATGTTCTT GGCACATCAA TGTTAGCCAT CGGTGCTGCC
TCTATGCTAC AGGTGGGATT GGCGCGTAGC GTTGTGGTTG GCGGAGCACA TTCACTGAAT
GTGGTTTTGG CGAATGCCAC CAATGTGGGT GGCGCTAACA TGACCAACGT AGGGGGGTTT
AATGGCCTTG CGGTGGGGGG AGCCCATCAG ACAGCTGTAG GCGGTGCTGC GACACTGGCT
GCCGGCGGCC CTATTGCTAT TGGGGCGGGT GGTGAGCTTA TCCTCAGTGG GGATATCGTA
AAAATTGTTG GTAAAAGTAA GGTTATTATT CAGGGCGGTG AAGTTCACAT TAACTCTGAT
GATTGTTGTG GTCGTAAAAC GGGCAATGGC GGCGGGGCAT TCGGTGCCTT TGCGAGCCTG
GCAGGTTTAT TGCCGCTGGC GGGTGCTATT GCCTTACCGC TACCGTTACC CGTGTTGCCA
ATAGTGGTGC CACCAGTGAC ATCGCCACCG GATCCAACAG TGCCACCGGA TCCGACATTG
CCACCGGATC CGACATTGCC ACCAGATCCA ACGTTGCCAC CAGATCCAAC GTTACCGCCG
GAAACCACGG CACCGCCGGA AACCACGGCA CCGCCAGAAA CCACGGCACC GCCGGAAACC
ACGGCACCGC CGGAAACCAC GGCACCGCCG GAAACCACGG CACCGCCGGA AACAACGGCA
CCGCCGGAAA CAACGGCACC GCCGGAAACA ACGGCACCGC CAGAGACAAC GGCACCGCCA
GAGACAACGG CACCGCCGGA AACAACGGCA CCGCCGGAAA CAACGGCACC GCCGGAAACA
ACGGCACCGC CAGAGACAAC GGCACCGCCG GAAACAACGG CACCGCCAGA GACAACGGCA
CCGCCGGAAA CAACGGCACC GCCAGAGACA ACGGCACCGC CGGAAACAAC GGCACCGCCA
GAGACAACGG CACCGCCAGA GACAACGGCA CCGCCGGAAA CAACGGCACC GCCAGAAACA
ACGGCACCGC CGGAAACAAC GGCACCGCCG GAAACAACGG CACCGCCAGA AACAACGGCA
CCGCCGGAAC CGACGCGAAC ACCGCCAGGG ACGCAGACGC CACCGCCTTG A
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| Protein sequence | MPYLLGEPAL VLSKLEGEEA FSTLYSYTIT AKTPANPLIP WQAASNVDLK SLIGKEMTIE
MELDGNGLGD VRSVGKGTRE ITGLVERARY IGRDANQAIF EITIKPWFYL ANLTSDFKIY
QNKNVVDIIE EVFSDYNFPF EKRLATTYPI LDFQVQYGET DFNFLQRLME EWGIYWFFEH
QDHKQKLILV DHVGAHKRSF STAYHAIEYL SDEPKAGEEY ITQFQTQETL TSGTWVTNDY
DFTKSRADIL AMDSKPRKTS FNDLEIYHWP GDYDQPDIGE HLSRVRIEER GALGSRAVGS
GQLRGIVCGA NFELKGFPVD KANREYMIIS SRLTVAEVDQ LSGGEDAFSC ESSFTVQPTT
KIYRHPQVTP KPKTNGPQNA IIVGPPGEEI WTDEYGRVKV RFVWDRYGTN SESDSCWLRV
SQAWAGNSFG GIYIPRIGQE VIVDCINGDP DRPMVMGSLY NNVTRPPWDL PANATQSGMV
SRTVGGGLTN YNGVRFEDKS GLEQYWEQAE RDMSRLTKNN ETQIIGADSV LNVGANRSEV
VGANYNQDVL GTSMLAIGAA SMLQVGLARS VVVGGAHSLN VVLANATNVG GANMTNVGGF
NGLAVGGAHQ TAVGGAATLA AGGPIAIGAG GELILSGDIV KIVGKSKVII QGGEVHINSD
DCCGRKTGNG GGAFGAFASL AGLLPLAGAI ALPLPLPVLP IVVPPVTSPP DPTVPPDPTL
PPDPTLPPDP TLPPDPTLPP ETTAPPETTA PPETTAPPET TAPPETTAPP ETTAPPETTA
PPETTAPPET TAPPETTAPP ETTAPPETTA PPETTAPPET TAPPETTAPP ETTAPPETTA
PPETTAPPET TAPPETTAPP ETTAPPETTA PPETTAPPET TAPPETTAPP ETTAPPETTA
PPEPTRTPPG TQTPPP
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