| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1240 |
|---|
| Symbol | |
|---|
| ID | 5388341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis IP 31758 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009708 |
|---|
| Strand | + |
|---|
| Start bp | 1462801 |
|---|
| End bp | 1463865 |
|---|
| Gene Length | 1065 bp |
|---|
| Protein Length | 354 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640864218 |
|---|
| Product | putative permease PerM |
|---|
| Protein accession | YP_001400221 |
|---|
| Protein GI | 153950918 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 0.00935863 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCTAGAGC TGTTGTTACA ATGGTATCGC CGTCGTTTTA CTGACCCGCA GGTCATTACG
TTACTGGTTA TCTTACTGGC GGGTTTCTGC ATTCTCTACT TCTTCAGCGG TATTTTAGCG
CCTTTGCTGG CCGCTCTTGT TTTGGCTTAT TTATTAGAGT GGCCAACTGC CCGCTTGCAG
CGTATTGGTT GTTCACGATC CTGGGCGGCC AGTATCGTAT TTGTGCTATT TGTCAGTATC
ATGCTGTTAG CGGTATTTGT CGTGGCACCA ACGGCTTGGC AGCAAGGGAT TAATCTGGCG
TCAGATATGC CAAAGATGAT CAATAAATTC AATGATTTTG CCCATACATT ACCGGCCCGT
TACCCGGCAC TGGTCGATGC CGGTATTGTC GATATGATGG CGGAAAATCT ACGCAGTAAA
ATGTCAGGTC TCGGCGACTC CGTGGTTAAA TTTTCTCTGG CCTCTTTGAT TGGCTTGCTG
ACATTGGCTA TTTATCTGAT TTTGGTTCCA TTGATGCTGT TCTTCTTACT CAAAGATAAA
GAACAGATGC TTAATGCGGT GCGCCGTGTT TTGCCGCGTA ACCGCGGTTT GGCCGGGCAG
GTATGGGTGG AGATGAACCA ACAGATTACT AACTATATTC GTGGCAAAGT GCTGGAAATG
GTGATTGTGG GTATTGCCAC TTATCTGGTG TTTTTCATCA TGGGGATGAA TTACGCTCTG
CTATTGGCGG TGCTGGTGGG GTTCTCTGTG TTGATTCCTT ATATTGGTGC CGTGATTGTC
ACCATCCCTG TGGTGTTGGT TGCGTTGTTC CAATGGGGTA TCGGGGCAGA TTTCTGGACG
CTTTTTGTCG CCTATTTAGT GGTGCAAGGG TTAGATGGCA ACTTGTTGGT CCCCGTGCTG
TTCTCTGAAG CCGTTAATCT GCATCCGTTG GTTATTATCC TATCAGTGAT CATTTTTGGC
GGTATGTGGG GTTTCTGGGG CGTATTTTTT GCCATTCCGC TGGCAACGCT GGTCAAAGCG
GTTATCCATG CCTGGCCAGA AGAATTCATT CCTGACGCGG ATTAA
|
|---|
| Protein sequence | MLELLLQWYR RRFTDPQVIT LLVILLAGFC ILYFFSGILA PLLAALVLAY LLEWPTARLQ
RIGCSRSWAA SIVFVLFVSI MLLAVFVVAP TAWQQGINLA SDMPKMINKF NDFAHTLPAR
YPALVDAGIV DMMAENLRSK MSGLGDSVVK FSLASLIGLL TLAIYLILVP LMLFFLLKDK
EQMLNAVRRV LPRNRGLAGQ VWVEMNQQIT NYIRGKVLEM VIVGIATYLV FFIMGMNYAL
LLAVLVGFSV LIPYIGAVIV TIPVVLVALF QWGIGADFWT LFVAYLVVQG LDGNLLVPVL
FSEAVNLHPL VIILSVIIFG GMWGFWGVFF AIPLATLVKA VIHAWPEEFI PDAD
|
|---|
| |