Gene YpsIP31758_1072 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpsIP31758_1072 
SymbolyntB 
ID5384633 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis IP 31758 
KingdomBacteria 
Replicon accessionNC_009708 
Strand+ 
Start bp1277228 
End bp1278196 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content51% 
IMG OID640864048 
Productnickel ABC transporter, permease protein 
Protein accessionYP_001400053 
Protein GI153950507 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0601] ABC-type dipeptide/oligopeptide/nickel transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value0.494547 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGGGGA TCTCGCTGTT TACTCTGCGC TTAATTTGCC TGCTGCTGGT CACCGCAGCC 
GGTACTTTTA CATTGCTGAG TTTTTCCCCT GTTGACCCTA TACGTGCCTA TATTGGTAGC 
GATTTACTGC ATGTGCCGCC AGAGCAATAC CCACTGATTG CGGCTCGTTG GGGGCTGGAT 
TTACCTTTGT GGCAACGTTT TTTGCATTGG TTTACTCAAG TGCTCCAAGG GGATTTTGGT 
TACTCGATGC TGTATAACGC GCCGGTTTCT CAGGTGATAG GTGAGCGTTT TGCTACCTCG 
TTTGCGTTAT TGGTCTCGGC CTGGCTATTT TCGGGAATTG TCGGGTTGCT ATTGGGGTTG 
ACCGCTGGGC GCTATCTCAA CCGTTGGCCT GATCGTCTGA TTTCAACGTT GTCCTATTTA 
TTGGCATCGT TGCCCACCTT TTGGATCGGT CTATTGTTGT TGTCGTTATT TGCGGTGAAG 
CTCAATTGGG CCCCCATTTG TTGCGCATGG ACGCCAGGGA GTCAGGCCGA GACCGCCAGT 
TGGGGGGATA AGCTTCACCA CCTGATTTTA CCGATGCTAG CGCTGGGGTT ACTGGGGGTT 
GGGAACATTG CACTGCATAC CCGTGCCAGA GTTGCTGAAG TGATGAATAG CGAATTTATT 
CGCTATGCAC AGGCGCAGGG GGATAAAGGC TGGCCTTTGG TGAACTTCCA TATTTTACGC 
CATGCCATTA CACCCGCGCT TTGCCTGCAA TTCGCTTCAG TTGGCGAATT ACTGGGGGGG 
TCTTTATTGG CCGAAAAAGT GTTCGCCTAT CCCGGTTTGG GGCAGGCGAC GATTGATGCC 
GGGTTGCATG GTGACATTCC ACTCTTGATG GGAATAGTGA TGTTCTGCGC CATATTGGTC 
TTTTGCGGTA ATAGCATTGC GAATGCCTTG TTACACCGTT TGAACCGGGG GGCTGCGCGG 
CAATTATGA
 
Protein sequence
MKGISLFTLR LICLLLVTAA GTFTLLSFSP VDPIRAYIGS DLLHVPPEQY PLIAARWGLD 
LPLWQRFLHW FTQVLQGDFG YSMLYNAPVS QVIGERFATS FALLVSAWLF SGIVGLLLGL 
TAGRYLNRWP DRLISTLSYL LASLPTFWIG LLLLSLFAVK LNWAPICCAW TPGSQAETAS 
WGDKLHHLIL PMLALGLLGV GNIALHTRAR VAEVMNSEFI RYAQAQGDKG WPLVNFHILR 
HAITPALCLQ FASVGELLGG SLLAEKVFAY PGLGQATIDA GLHGDIPLLM GIVMFCAILV 
FCGNSIANAL LHRLNRGAAR QL