Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0805 |
Symbol | |
ID | 5384351 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | + |
Start bp | 965818 |
End bp | 967215 |
Gene Length | 1398 bp |
Protein Length | 465 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 640863768 |
Product | ImpA domain-containing protein |
Protein accession | YP_001399789 |
Protein GI | 153950380 |
COG category | [S] Function unknown |
COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 48 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACACACT TACCTGAACG CCACCTGAAA ACCGGCGGCG ACCCCCGCCA TTTTGCTGAA TTCAGCGCCT TACGTAACGA AATCGGTAAA TTACACCATC CCGCCCGCCC GGATGTTGAC TGGACGAGGG TCGAGCAGCT TTGTCTCGCA CTGTTTCGCC AGAATGGCGT TGAGCTACAG ACCACGGTTG ATTTTACGCT GGCTCGGACG CACGTTGCTG GGCTGGCCGG GTTATGTGAG GGGCTGGAAC TGCTGGCGGG ATTGCTCTCT CATCAATGGA GCACCTTGTG GCCGCCGCAA ACCCATGCGC GGGTGGAGTT ACTGGCTTGG CTGAGTGACC GATTGCAACA GGTCTGGCGT ACCATGACCC TGTGCTACGG TGATCTGGCG CTGGTTTACC GTGCTGAGCA GGCGCTGGAA CAACTCTGCA CGCAACTGCA AACGTTGGAA CTCAAGCATC TGAGTAAACT GGACGGTGTT CGCCTCATGT TGCATAACGC CGCATTGCGG CTAGAGAGTG CCGAAGCGGG CGCTGATACA CCCGACCGAT TGACTGTGCC AATACGGCAC GCCGAGCTCT CGGAACCACA ACCCACCTTC GTGTCGGCCA CAGCCAGTGT TCCGCTGGTC TATATTGTCA ACGAACCGGC TCCGCCGAGT GTACAGGTGG CTTTAGCCCC ACCTGAGCCG CCACCCCCTC CGCGCTGGAA AGTCGGGCAC GGTTTTATTG CCGGGTTATT GTTGATGGCG GTGCTGATGA CGGGCGGTTT TGCTATCTGG CAGTCACTCT CATCCGATCC GTTGCGGGAG GCATTACTCG CCAATGCCAG CCCTTTACCC ACACTGCTGA CGGCTAAATC AATCAATGAA CTGCAAAAGC AGACCTCAGA CGCCGAACTG GGACGTTTGG CTGAACCCGT GCTGCAAGCC AGTGGCTCAC AGTTAGAACA ATTGGCGATA TTGCCACCGT TATGGGCGCA AATACGGGGT GATGCACTGT TATCACAAGC ACAACAATTG TGGCCCGCCA GCCAAGACGT TAAGCGTTTG AGCACATTGT GGCAGCAACA ACGAGAGGCT GGAGCCGCCC CGCTGGGGGA GTTGAAACAC TATGCACTGG CGCAAGAGCG CCTACGGCAA CTGGCCGATC GCCTAAATGG ATTGGATGAG AAAAAGGGGC GCTATATGAC GGTCTCGGAG CTGAAAACGG TGGTCTTTGC GATACAACAA CCGCTGGCAA AAACCTTACC GCTGGAAGAG TTGCTGCGGC AGTATCAGGC ACAGTCCGAG TCAGGGCAAA CTCCATCTTC AGCACTGCGC CAACAGATTG ACAGCCGGTT TACTCAACTG CTGAACCGGT ATGCGTTACT CACGTTGCCC GAAACGGCAT CGCCGTAG
|
Protein sequence | MTHLPERHLK TGGDPRHFAE FSALRNEIGK LHHPARPDVD WTRVEQLCLA LFRQNGVELQ TTVDFTLART HVAGLAGLCE GLELLAGLLS HQWSTLWPPQ THARVELLAW LSDRLQQVWR TMTLCYGDLA LVYRAEQALE QLCTQLQTLE LKHLSKLDGV RLMLHNAALR LESAEAGADT PDRLTVPIRH AELSEPQPTF VSATASVPLV YIVNEPAPPS VQVALAPPEP PPPPRWKVGH GFIAGLLLMA VLMTGGFAIW QSLSSDPLRE ALLANASPLP TLLTAKSINE LQKQTSDAEL GRLAEPVLQA SGSQLEQLAI LPPLWAQIRG DALLSQAQQL WPASQDVKRL STLWQQQREA GAAPLGELKH YALAQERLRQ LADRLNGLDE KKGRYMTVSE LKTVVFAIQQ PLAKTLPLEE LLRQYQAQSE SGQTPSSALR QQIDSRFTQL LNRYALLTLP ETASP
|
| |