Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpsIP31758_0487 |
Symbol | |
ID | 5388368 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis IP 31758 |
Kingdom | Bacteria |
Replicon accession | NC_009708 |
Strand | - |
Start bp | 561054 |
End bp | 561752 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640863458 |
Product | hypothetical protein |
Protein accession | YP_001399480 |
Protein GI | 153948216 |
COG category | [S] Function unknown |
COG ID | [COG0586] Uncharacterized membrane-associated protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.0000202069 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATCA TTAAAGAACT CTTACATGCT CTATGGGCTC AAGACTATGA GACACTGGCG GACCCATCGC TGGTGTGGGC CATCTATCTA CTGCTGTTTG TGATACTTTT TTTGGAGAAT GGCCTGCTTC CTGCTGCCTT TTTACCGGGT GATAGCCTAC TGATTCTGGT CGGGGTGCTG ATCGCCAAAG GTGCGATGAG TTTTCCAGTG ACCCTGGTGG TCTTGACCAC GGCAGCAAGC CTTGGGTGTT GGGTAAGTTA TATTCAGGGC CGATGGCTGG GGAATACGAA AGTTGTACAG GGGTGGCTGT CCCATCTGCC AGCCCATTAC CATCAACGCG CTCACAATCT TTTTCACCGC CATGGGTTAT CCGCCCTGCT GGTTGGCCGT TTTCTGGCAT TCGTCCGGAC CTTATTGCCA ACCATTGCCG GTCTTTCAGG CCTGGACAAC GCCCGCTTCC AATTCTTTAA CTGGATGAGT GGGTTACTCT GGGTATTGAT CTTGACCACC ATGGGCTTCG CCTTTGGCAA GACACCGGTA TTCCTGAGAT ATGAAGATGA AGTGATGTTC GTTCTAATGT TACTGCCACT GGCGCTGCTG GTGATCGGTT TGTTTGGTTC TTTGTACGTG CTGTGGCGTA AAAAAAATGC GACGCCCGCT AAAGTCAGTC ATGACAATAA GAAAGGTAAG TCAGAGTGA
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Protein sequence | MDIIKELLHA LWAQDYETLA DPSLVWAIYL LLFVILFLEN GLLPAAFLPG DSLLILVGVL IAKGAMSFPV TLVVLTTAAS LGCWVSYIQG RWLGNTKVVQ GWLSHLPAHY HQRAHNLFHR HGLSALLVGR FLAFVRTLLP TIAGLSGLDN ARFQFFNWMS GLLWVLILTT MGFAFGKTPV FLRYEDEVMF VLMLLPLALL VIGLFGSLYV LWRKKNATPA KVSHDNKKGK SE
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