| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0063 |
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| Symbol | yscL |
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| ID | 5798254 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 41468 |
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| End bp | 42100 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641337874 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001604494 |
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| Protein GI | 162417755 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1317] Flagellar biosynthesis/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR01145] ATP synthase, F1 delta subunit
[TIGR02499] type III secretion apparatus protein, HrpE/YscL family |
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Plasmid Coverage information |
| Num covering plasmid clones | 75 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 93 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCAGCCAT TTGTTCAAAT AATACCAAGT AATCTCTCGC TCGCTTGCGG TCTGCGTATT
TTGCGCGCCG AAGATTACCA ATCCAGTTTA ACAACCGAAG AGTTGATTAG TGCCGCAAAA
CAGGATGCTG AAAAGATCCT GGCTGACGCC CAAGAGGTTT ATGAGCAACA AAAGCAGTTA
GGATGGCAGG CTGGCATGGA TGAGGCGCGT ACCTTACAGG CGACTTTGAT TCATGAAACA
CAGTTACAAT GTCAGCAATT TTATCGCCAC GTCGAACAAC AGATGAGTGA AGTTGTACTT
TTGGCGGTAC GTAAAATCCT CAATGACTAT GATCAAGTGG CTATGACACT GCAAGTTGTG
CGGGAGGCTT TAGCCTTGGT GAGTAATCAG AAGCAAGTCG TGGTCAGGGT CAACCCTGAT
CAGGCAGGAG CTATTCGTGA ACAAATAGCT AAAGTACATA AAGACTTCCC GGAAATAAGC
TATTTAGAGG TGACTGCCGA TGCGCGTTTG GATCAAGGGG GCTGTATATT AGAGACTGAG
GTAGGTATTA TTGACGCGAG TATTGATGGG CAAATTGAAG CACTTTCTCG GGCAATATCT
ACCACTTTAG GACAAATGAA AGTTACAGAA TAG
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| Protein sequence | MQPFVQIIPS NLSLACGLRI LRAEDYQSSL TTEELISAAK QDAEKILADA QEVYEQQKQL
GWQAGMDEAR TLQATLIHET QLQCQQFYRH VEQQMSEVVL LAVRKILNDY DQVAMTLQVV
REALALVSNQ KQVVVRVNPD QAGAIREQIA KVHKDFPEIS YLEVTADARL DQGGCILETE
VGIIDASIDG QIEALSRAIS TTLGQMKVTE
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