| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0050 |
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| Symbol | lcrF |
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| ID | 5798258 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 33751 |
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| End bp | 34566 |
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| Gene Length | 816 bp |
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| Protein Length | 271 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641337861 |
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| Product | thermoregulatory protein LcrF |
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| Protein accession | YP_001604481 |
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| Protein GI | 162417806 |
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| COG category | [K] Transcription |
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| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 46 |
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| Plasmid unclonability p-value | 0.24501 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 94 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCATCAC TAGAGATTAT TAAATTAGAA TGGGTCACAC CTATATTTAA GGTTGTTGAG
CATTCACAAG ATGGCCTATA TATTCTTTTG CAAGGTCAGA TTTCATGGCA GAGCAGCGGT
CAGACATATG ATTTAGATGA GGGGAATATG CTGTTTTTGC GTCGTGGCAG CTATGCTGTT
CGATGTGGTA CAAAAGAACC CTGCCAATTA CTTTGGATTC CATTACCCGG CAGTTTTTTG
AGTACTTTTT TGCATCGCTT TGGTTCTTTG CTTAGTGAAA TTGGACGAGA CAACTCCACA
CCCAAACCAT TGTTAATTTT TAATATTTCA CCAATATTAT CACAATCCAT TCAAAATCTA
TGTGCCATAT TGGAACGGAG TGATTTTCCG TCAGTATTAA CGCAACTGCG TATTGAGGAA
TTACTGCTTT TGCTTGCCTT TAGCTCGCAA GGGACTTTAT TTCTCTCGGC TCTGCGCCAT
TTAGGCAACC GCCCAGAAGA ACGGTTGCAA AAATTTATGG AGGAAAATTA TCTACAAGGG
TGGAAGCTAA GCAAATTTGC GCGAGAATTC GGCATGGGAT TAACCACATT CAAAGAACTG
TTTGGTACAG TTTATGGCAT TTCACCACGC GCCTGGATAA GCGAGCGACG TATTCTCTAT
GCTCACCAAT TACTTCTTAA TGGTAAGATG AGTATTGTTG ATATTGCCAT GGAAGCGGGG
TTCTCGAGTC AGTCTTATTT CACTCAAAGT TATCGACGTC GCTTCGGATG CACTCCAAGC
CAAGCCCGTC TTACTAAAAT AGCAACCACA GGCTAA
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| Protein sequence | MASLEIIKLE WVTPIFKVVE HSQDGLYILL QGQISWQSSG QTYDLDEGNM LFLRRGSYAV
RCGTKEPCQL LWIPLPGSFL STFLHRFGSL LSEIGRDNST PKPLLIFNIS PILSQSIQNL
CAILERSDFP SVLTQLRIEE LLLLLAFSSQ GTLFLSALRH LGNRPEERLQ KFMEENYLQG
WKLSKFAREF GMGLTTFKEL FGTVYGISPR AWISERRILY AHQLLLNGKM SIVDIAMEAG
FSSQSYFTQS YRRRFGCTPS QARLTKIATT G
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