| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_B0044 |
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| Symbol | yscQ |
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| ID | 5798292 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010157 |
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| Strand | + |
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| Start bp | 28970 |
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| End bp | 29893 |
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| Gene Length | 924 bp |
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| Protein Length | 307 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641337855 |
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| Product | type III secretion system protein |
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| Protein accession | YP_001604475 |
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| Protein GI | 162417770 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1886] Flagellar motor switch/type III secretory pathway protein |
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| TIGRFAM ID | [TIGR02551] type III secretion system apparatus protein YscQ/HrcQ |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.000000000000156559 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 87 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTTTGT TAACCTTGCC ACAGGCCAAA TTAAGTGAAC TGTCGCTACG TCAACGGCTC
AGCCATTATC AACAAAACTA CTTGTGGGAA GAGGGAAAAC TCGAACTTAC CGTCTCTGAG
CCTCCTTCGT CTTTGAACTG TATATTACAG TTACAATGGA AGGGAACGCA CTTCACGCTC
TACTGTTTTG GCAATGATCT GGCTAACTGG TTAACCGCCG ACTTACTAGG GGCTCCATTC
TTTACTCTGC CGAAAGAGTT GCAACTTGCG CTGTTGGAAC GCCAGACAGT TTTCCTGCCG
AAACTGGTCT GTAATGATAT AGCGACAGCG TCTCTTTCTG TCACGCAACC TCTGTTGAGT
TTGCGGCTGT CCCGAGATAA TGCGCATATC TCCTTCTGGC TAACCTCAGC TGAGGCTCTG
TTCGCTCTGT TACCCGCACG ACCCAATTCT GAGCGCATAC CTTTGCCTAT CCTTATTTCT
TTGCGTTGGC ATAAAGTATA CCTGACTCTA GATGAGGTTG ATTCCCTTCG ATTAGGTGAT
GTGTTGTTGG CCCCTGAGGG GAGTGGGCCT AATTCGCCAG TACTCGCCTA TGTTGGTGAG
AACCCTTGGG GCTACTTTCA ATTACAATCA AATAAATTGG AGTTTATCGG TATGAGTCAT
GAATCTGACG AACTTAACCC CGAACCATTG ACCGATTTGA ACCAACTTCC GGTTCAAGTT
AGCTTTGAAG TGGGGCGGCA AATCTTAGAT TGGCACACAC TCACTAGCCT GGAGCCGGGT
TCTCTTATTG ATCTTACAAC ACCTGTTGAT GGTGAAGTGC GCTTGCTGGC TAACGGCCGG
TTGCTTGGAC ATGGTCGATT GGTCGAGATC CAAGGGCGCC TCGGGGTTCG AATTGAACGC
CTGACAGAGG TTACGATTTC ATGA
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| Protein sequence | MSLLTLPQAK LSELSLRQRL SHYQQNYLWE EGKLELTVSE PPSSLNCILQ LQWKGTHFTL
YCFGNDLANW LTADLLGAPF FTLPKELQLA LLERQTVFLP KLVCNDIATA SLSVTQPLLS
LRLSRDNAHI SFWLTSAEAL FALLPARPNS ERIPLPILIS LRWHKVYLTL DEVDSLRLGD
VLLAPEGSGP NSPVLAYVGE NPWGYFQLQS NKLEFIGMSH ESDELNPEPL TDLNQLPVQV
SFEVGRQILD WHTLTSLEPG SLIDLTTPVD GEVRLLANGR LLGHGRLVEI QGRLGVRIER
LTEVTIS
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