Gene YpAngola_A3509 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3509 
Symbol 
ID5801985 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3726111 
End bp3726755 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content43% 
IMG OID641341326 
Productmajor facilitator transporter 
Protein accessionYP_001607839 
Protein GI162420580 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2271] Sugar phosphate permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.36765 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.167547 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATAAAT GGACAAAGCT TTGCTTCCTC ATTTTGGGTG GAGGGACGAT TTTCAAACTC 
TCCAGTATGA AAGATGTGTT TTACATCCCT ATGCAACAAG ACTGGGGGCT AACGAATACA
CAGATTGGTT TTGGTTTTAC CGTATATGCC ATCATTCAGA CCGTTGGCTT ATTCAGTTCT
CTTTATATTG CTGATCGTTT TTCGAAAAAG ATCTTACTGC CCGTAGGGTT GATCGGTGTG
GGCCTCTGTG GCGCATACTT AGCCACGCTT CCACCGTTTA CCGGTTATCT CATCGCCTTT
GGTGCTATGG CATTTTTTGG GGAAGTGGTT TACTGGCCTG TACTGTTGAA AGCAGTAAGG
TTGCTGGGAA CCAAAGAAGA ACAAGGACGC ATGTTTGGTT TTCTGGAAGC GGGTCGCGGT
GTGATTGATG TACTTATCGC TTCTGGTGCC CTGTTTGTTT TTGTTCAGTT TGGTGAAGGT
AAAGCGGGGA TGCAGGCCGG GCTAATCTAT TACACGATAG CCACGATATT GGTTGGCGTC
ATTACTTGGT TTATCGTAGA CAGTGATGAC AAGATTAAGG TAGATAATGC AGATAAAGTT
AATAAACGAG ACTGTAAACA ATATTGTGTA ATTGCCTGTT TTTGA
 
Protein sequence
MNKWTKLCFL ILGGGTIFKL SSMKDVFYIP MQQDWGLTNT QIGFGFTVYA IIQTVGLFSS 
LYIADRFSKK ILLPVGLIGV GLCGAYLATL PPFTGYLIAF GAMAFFGEVV YWPVLLKAVR
LLGTKEEQGR MFGFLEAGRG VIDVLIASGA LFVFVQFGEG KAGMQAGLIY YTIATILVGV
ITWFIVDSDD KIKVDNADKV NKRDCKQYCV IACF