Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3509 |
Symbol | |
ID | 5801985 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3726111 |
End bp | 3726755 |
Gene Length | 645 bp |
Protein Length | 214 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641341326 |
Product | major facilitator transporter |
Protein accession | YP_001607839 |
Protein GI | 162420580 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.36765 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 34 |
Fosmid unclonability p-value | 0.167547 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAATAAAT GGACAAAGCT TTGCTTCCTC ATTTTGGGTG GAGGGACGAT TTTCAAACTC TCCAGTATGA AAGATGTGTT TTACATCCCT ATGCAACAAG ACTGGGGGCT AACGAATACA CAGATTGGTT TTGGTTTTAC CGTATATGCC ATCATTCAGA CCGTTGGCTT ATTCAGTTCT CTTTATATTG CTGATCGTTT TTCGAAAAAG ATCTTACTGC CCGTAGGGTT GATCGGTGTG GGCCTCTGTG GCGCATACTT AGCCACGCTT CCACCGTTTA CCGGTTATCT CATCGCCTTT GGTGCTATGG CATTTTTTGG GGAAGTGGTT TACTGGCCTG TACTGTTGAA AGCAGTAAGG TTGCTGGGAA CCAAAGAAGA ACAAGGACGC ATGTTTGGTT TTCTGGAAGC GGGTCGCGGT GTGATTGATG TACTTATCGC TTCTGGTGCC CTGTTTGTTT TTGTTCAGTT TGGTGAAGGT AAAGCGGGGA TGCAGGCCGG GCTAATCTAT TACACGATAG CCACGATATT GGTTGGCGTC ATTACTTGGT TTATCGTAGA CAGTGATGAC AAGATTAAGG TAGATAATGC AGATAAAGTT AATAAACGAG ACTGTAAACA ATATTGTGTA ATTGCCTGTT TTTGA
|
Protein sequence | MNKWTKLCFL ILGGGTIFKL SSMKDVFYIP MQQDWGLTNT QIGFGFTVYA IIQTVGLFSS LYIADRFSKK ILLPVGLIGV GLCGAYLATL PPFTGYLIAF GAMAFFGEVV YWPVLLKAVR LLGTKEEQGR MFGFLEAGRG VIDVLIASGA LFVFVQFGEG KAGMQAGLIY YTIATILVGV ITWFIVDSDD KIKVDNADKV NKRDCKQYCV IACF
|
| |