| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A3289 |
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| Symbol | sbcC |
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| ID | 5801766 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pestis Angola |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010159 |
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| Strand | + |
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| Start bp | 3491903 |
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| End bp | 3495565 |
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| Gene Length | 3663 bp |
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| Protein Length | 1220 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641341113 |
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| Product | nuclease SbcCD, C subunit |
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| Protein accession | YP_001607635 |
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| Protein GI | 162421047 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0419] ATPase involved in DNA repair |
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| TIGRFAM ID | [TIGR00618] exonuclease SbcC |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 0.267466 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAATTT TGAGCCTACG TCTGAAAAAC ATTAACTCAT TACAGGGCGA ATGGAAGATA
GATTTCACTG CCGAACCTTT TGCCAGTAAC GGCTTATTTG CTATCACCGG CCCAACTGGC
GCGGGAAAAA CCACGCTGTT AGATGCTATC TGTCTGGCGT TGTACCACCA AACCCCTCGC
CTCATCGTAA CCCCCAGCCA GAATGAACTG ATGACGCGCC ATACTGCAGA ATCACTGGCA
GAAGTTGAAT TTGACGTGAA AGGTATCCGT TATCGCGCCT TTTGGAGCCA GCGCCGTGCC
AGAAACAGCC CAGATGGCAA TCTGCAAGCC CCCAAAGTAG AACTGGCCTT ATGCGAAAAC
GGCAAAATCT TGGCCGATAA GGTCCGCGAT AAATTAGATA TGATCGCGGC AATCACCGGT
CTGGACTTTG GCCGTTTTAC CAAGTCCATG ATGCTGTCAC AGGGGCAATT TGCCGCCTTC
CTCAATGCAG ATGCCAATGA TCGCGCTGAG TTACTGGAAG AATTGACGGG AACCGACATC
TACGGACGTC TATCTGAACG CGTATTTGAA AAACATAAAC AAGCCAAGAT CGATCTGGAT
GCATTGCACC AACGTGCCAG CGGCATTGAA CTGTTAAATG AAGAACAACG CCTGGCCCTG
GCACAGCAAA TTGATGCACT GAGTCAACAA GAGCAGCAGC TCAGTAAAGA ACAACTCGTC
ACGCAAAACC AAATAAACTG GCTAACAGGT TGGCAGCAGC AGCAACAGGT GCTCGTTGAG
CAAGAGTATC AACAGGCACT ACCCGGCCTA CAACGTTTAG CGCGTAGCGA ACCGGCAGAA
AAATTGCGCC CGTTGCAACG AGAACGTGAC CGTAGCCAAA AAGATTTACA ACAAACACAG
CAACGCATCA CCGCATTGGC ACAACAACAG CAGCAATATC TGGCACAGCT CACACCACTG
ACTCAGGCAG TAGAGCAAGC CACTGCGGCA CGCCAACAGC AACAGCTTAA TCAACATGAG
CAAGAAACAC TCATCGAACA ACGGATCGTG CCGCTGGATA ACCTTATCAC CCAGCAGCAG
CAGACATTGT CACAACTTGC AGGGCAAATA CAGCAATTAC GCGCTAAAGA GCAGCAAAAC
AGCCAACAAC TTGCGCTGAA TGAGCAAAAA CTATTGCAGA CCCATCAACG CCTGCAACAG
CTAGCAGACT ATGCCAATTT ACATGCCCAT CATCAGCACT GGGAAAAACA TCTTCCCTTA
TGGCATGAGC AGTTCCGCCA ATTACAACTA CAGCAACAAC AATCAGCTCA AAGTGAGCAA
CAACTACACC AACAAACAAC CTTACTCGCC ACGCTGCAAC AGCAGGCTAC AACACTAAGT
GCGCAAGAGA AACAACAACA AGTGGCCTTA GCGGAGGCTC GCGCACAGGC AAGCTATCTT
CAGCAGAAAT TATTAGTCCT TGAACAACAG CAACCTTCAG CACAGTTGCG CCAGCAACTA
AACGAGTTCA ATGAGCAACG TCAGATATGC CAACAACTGG CGGCTTTATC GCCTTTAGCA
CAACAAATAC AAGCACTCTA TGATAAGCAG CAGCAACAAT TTACGGCTCA GCAGCAACAG
CTTAAACAGT TAGAGCAACA GTTAACCGAA AAACGCCAGT TATATCAGCA GCAGAAACAA
CATCTGGTTG ATTTAGAAGC CTTACTGGAA CGCGAAAAAC AGATTGTCAC ACTGGAAGCA
GAAAGAGCCA AACTGCAACC AGGAGATGCC TGCCCGCTAT GTGGTGCTGT GGAGCACCCG
GCGATTACTG CGTACCAAGC AGTGAAACCC TCAGAAACAG CCGTGCGAGT TGCAAAACTG
CGCCTACAGG TCGAACAGCT TTACACTGAA GGCACTGAGT TGCGTACCCA AGTTGCAAGC
ATGCAACAAC ATCAGCAGCG TATAGAGCAA GAGTTACAAG ACCATCGCCA ACAGTTAGCT
GCATATCAGC AACGTTGGCA AACACTGGCA CAACCGTTAT CACTGGCCTT CACCTTGAAT
GAACCTGACG CATTAGCCCT GTGGCTAGAG CAACATGAGC AGCAAGAACA GGCGTGTCAA
CTAAAGCTGG TGGAGTATGA GCGTCTGACT CAGCAGTATC AGCAGGCCAA AGATATCCTG
ACCCAGTTGG AACAACGGCA GCAAGAACAT CAACAACAGT TGGCACTGAT CACTGAACGC
CAAAAAAATG CTCAACAAAC CTACCAACAG CTGCAATCGC AATATCAGCA CCAGCAAGAA
GCACTTATAG CTCAGCAGCA AGTGTTAAAC CATACGCTGA CTGAATTGTC CTTATCAGTA
CCCGATGCCG ATCAACAACA GGATTGGCTA GCACAGCGGG AAGAGGAATG TCAGCGCTGG
CAACAACATC AGCAAGAGCA ACAGCGGCTC ACTATTGAAC AAAAAACGCT GGAAACACGT
ATTGAGAATG AACGGCGTCA TTTACAGGAG TGTATTGACC AATTATCGGC GCTAAGTCAA
CAACGCCAGC AAGCTGAAAC GCTATTACAG CAGCAAATCC AGCAGCGCCA GGCACTGTTT
GGTGAAGATA TCGTTGCCGA AGTCCGCCAG CGATTACGCT TACAGCAGCA ACAGGCAGAG
CTTGCCCAGC AAAACGCAGA AAAAGCCCTA CAACAGGCTC AATCCCAACT GAATAGGCTA
TCAGGTGAAC TGACCGGGCT GGAGCAACAA TGCCAACAGT ATCAGCAACG TGCTACCACC
ACACAGGCTG AATTGCAACA AGCACTGTCC ACCAGCGAAT TTGCTGATGA AACGGCATTA
ACCGCAGCCC TGTTAAGTGA AGAAGAAAGG CAGCATCTAC AACAATTGCA ACAGCAATTA
AATGAGCGAC GGCAACAAGC TCAGATCCGC CTGCAACAAG CCAGGGAGAT ATTGGATCAA
CATTTACAGC TTTGTCCCCA AGGTGTCGAT AAGTCCTCTG AATTAACCTT ATTACAACAA
CAGTCAGAAC AGCTATTGGC ACAACTGAAA ACCACAACGT TACGGCAAGG CGAACTACGC
AATCAGTTAG AAAGCGACAC CACTCGACGT CATAATCAAC GTACGCTATT TGAACAAATT
GAGCGTAGTC AGCAGCAATA TGATGACTGG AGTTACCTCA ATCAATTAAT TGGCTCCAAA
GAAGGCGATA AATTCCGTAA ATTTGCGCAA GGTCTCACAC TCGATCATCT GGTTTATCTG
GCCAATAACC AACTTAGTCG TTTACATGGG CGCTATCTAT TACAACGTAA GACTACAGAT
GCATTGGAAT TACAGGTGGT AGATACCTGG CAAGCGGATG CCATACGCGA TACTCGTACC
CTGTCAGGAG GAGAGAGTTT TCTGGTGAGT CTGGCGCTAG CATTAGCACT GTCTGATTTA
GTCAGCCATA AAACCAGTAT TGACTCACTG TTTCTTGATG AAGGCTTCGG TACGTTGGAT
GCTGAAACAT TGGATACCGC ACTGGATGCC TTGGATAGCC TGAATGCTTC CGGCAAAACT
ATTGGGGTGA TAAGCCATGT AGAGGCAATG AAAGATCGGA TCCCGGTGCA GATAAAAGTG
AAAAAAGTTA ACGGGTTAGG CGTCAGCCGT TTGGATAATG CCTTCCGAGT CAATCAAGAC
TGA
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| Protein sequence | MKILSLRLKN INSLQGEWKI DFTAEPFASN GLFAITGPTG AGKTTLLDAI CLALYHQTPR
LIVTPSQNEL MTRHTAESLA EVEFDVKGIR YRAFWSQRRA RNSPDGNLQA PKVELALCEN
GKILADKVRD KLDMIAAITG LDFGRFTKSM MLSQGQFAAF LNADANDRAE LLEELTGTDI
YGRLSERVFE KHKQAKIDLD ALHQRASGIE LLNEEQRLAL AQQIDALSQQ EQQLSKEQLV
TQNQINWLTG WQQQQQVLVE QEYQQALPGL QRLARSEPAE KLRPLQRERD RSQKDLQQTQ
QRITALAQQQ QQYLAQLTPL TQAVEQATAA RQQQQLNQHE QETLIEQRIV PLDNLITQQQ
QTLSQLAGQI QQLRAKEQQN SQQLALNEQK LLQTHQRLQQ LADYANLHAH HQHWEKHLPL
WHEQFRQLQL QQQQSAQSEQ QLHQQTTLLA TLQQQATTLS AQEKQQQVAL AEARAQASYL
QQKLLVLEQQ QPSAQLRQQL NEFNEQRQIC QQLAALSPLA QQIQALYDKQ QQQFTAQQQQ
LKQLEQQLTE KRQLYQQQKQ HLVDLEALLE REKQIVTLEA ERAKLQPGDA CPLCGAVEHP
AITAYQAVKP SETAVRVAKL RLQVEQLYTE GTELRTQVAS MQQHQQRIEQ ELQDHRQQLA
AYQQRWQTLA QPLSLAFTLN EPDALALWLE QHEQQEQACQ LKLVEYERLT QQYQQAKDIL
TQLEQRQQEH QQQLALITER QKNAQQTYQQ LQSQYQHQQE ALIAQQQVLN HTLTELSLSV
PDADQQQDWL AQREEECQRW QQHQQEQQRL TIEQKTLETR IENERRHLQE CIDQLSALSQ
QRQQAETLLQ QQIQQRQALF GEDIVAEVRQ RLRLQQQQAE LAQQNAEKAL QQAQSQLNRL
SGELTGLEQQ CQQYQQRATT TQAELQQALS TSEFADETAL TAALLSEEER QHLQQLQQQL
NERRQQAQIR LQQAREILDQ HLQLCPQGVD KSSELTLLQQ QSEQLLAQLK TTTLRQGELR
NQLESDTTRR HNQRTLFEQI ERSQQQYDDW SYLNQLIGSK EGDKFRKFAQ GLTLDHLVYL
ANNQLSRLHG RYLLQRKTTD ALELQVVDTW QADAIRDTRT LSGGESFLVS LALALALSDL
VSHKTSIDSL FLDEGFGTLD AETLDTALDA LDSLNASGKT IGVISHVEAM KDRIPVQIKV
KKVNGLGVSR LDNAFRVNQD
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