Gene YpAngola_A3234 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A3234 
Symbol 
ID5801710 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp3431387 
End bp3431752 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content49% 
IMG OID641341062 
Productprepilin peptidase dependent protein 
Protein accessionYP_001607585 
Protein GI162418756 
COG category[N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG4967] Tfp pilus assembly protein PilV 
TIGRFAM ID[TIGR02532] prepilin-type N-terminal cleavage/methylation domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value0.568305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGAGACAG GCGGTTTCAA CCTACGTCAC CTGCGTGGAT TCAGCTTACT GGAAGTTTTG 
ATTGCCGCAT TATTTTTCTC AATCTCACTA CTGGGGCTAC TGCAATACCA TCAGGCACTT
TTACAGGGCT TTGCCTCCTC ATGGCAACAA CGGCAAGCCT GGTCGTGGTT ACATCAATAT
ATGGAGAGTC AGAGCGGTAC AGACCCCGAA GAACGGTGGG CACCTGAAGT GAAACCAGGC
TGGCACTATC GCCAATTTAT CGATCGCATT GAGGGGGATT GCCGGGAATT TAGCGTTAAG
TTGATAACCC GCCAAGACTC GCCAGTAGAA TTAAGCCGAT GGTTTTGTTC AACTGAGATG
ATTTAG
 
Protein sequence
METGGFNLRH LRGFSLLEVL IAALFFSISL LGLLQYHQAL LQGFASSWQQ RQAWSWLHQY 
MESQSGTDPE ERWAPEVKPG WHYRQFIDRI EGDCREFSVK LITRQDSPVE LSRWFCSTEM
I