Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A3234 |
Symbol | |
ID | 5801710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | - |
Start bp | 3431387 |
End bp | 3431752 |
Gene Length | 366 bp |
Protein Length | 121 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641341062 |
Product | prepilin peptidase dependent protein |
Protein accession | YP_001607585 |
Protein GI | 162418756 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG4967] Tfp pilus assembly protein PilV |
TIGRFAM ID | [TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 39 |
Fosmid unclonability p-value | 0.568305 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGAGACAG GCGGTTTCAA CCTACGTCAC CTGCGTGGAT TCAGCTTACT GGAAGTTTTG ATTGCCGCAT TATTTTTCTC AATCTCACTA CTGGGGCTAC TGCAATACCA TCAGGCACTT TTACAGGGCT TTGCCTCCTC ATGGCAACAA CGGCAAGCCT GGTCGTGGTT ACATCAATAT ATGGAGAGTC AGAGCGGTAC AGACCCCGAA GAACGGTGGG CACCTGAAGT GAAACCAGGC TGGCACTATC GCCAATTTAT CGATCGCATT GAGGGGGATT GCCGGGAATT TAGCGTTAAG TTGATAACCC GCCAAGACTC GCCAGTAGAA TTAAGCCGAT GGTTTTGTTC AACTGAGATG ATTTAG
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Protein sequence | METGGFNLRH LRGFSLLEVL IAALFFSISL LGLLQYHQAL LQGFASSWQQ RQAWSWLHQY MESQSGTDPE ERWAPEVKPG WHYRQFIDRI EGDCREFSVK LITRQDSPVE LSRWFCSTEM I
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