| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A2869 |
|---|
| Symbol | |
|---|
| ID | 5801341 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 3011821 |
|---|
| End bp | 3013032 |
|---|
| Gene Length | 1212 bp |
|---|
| Protein Length | 403 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641340720 |
|---|
| Product | outer membrane usher protein |
|---|
| Protein accession | YP_001607250 |
|---|
| Protein GI | 162421627 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG3188] P pilus assembly protein, porin PapC |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 33 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 49 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCTGTCT CCGTTGTTGG AGTGAAGATA TCAAAAACAG GCAATTACAC AATATTGTTT
ACAGTCTCTC TGGATCGTTA TGGGAACAGT AATGGGATTG ATGAAATTGA CTTTCGTACC
CGTAATCGGT TGTCACTCAG TGTCTCCCAA CGCGTAGCGG ATAATATGTC AGTTAACCTG
AACAGCAGCC TTTATAGCTA CTGGGGCAAT CAGGATGCAT CACAACAATA TTCGGTGGGT
TTTAACCATT CACTGCGCTC TTTCTCTTAT ACGGTGAGTG CGATACGCAC CAGTAATAGC
GGTAATAGCA GTAATGGCGA CAATGATCGG GAATATGAAA ATAGTTATAT GCTCGCGGTC
AGCATACCTA TTGGCGGGAG TGGGAAGAAT AAACCGCTGT TTAGTTCGCT CTCGACCATG
GTTAGCCATA GTGAAGCCGG TGATACACAG TTACAGCTGA CTACGAGTGG TAGCCGGGGT
GATCAGAACG AGTTGACCTA TGGAATAGGT ACGTCATATG GCAATCGTAA TGATGCGTCT
TCTGAGCAAT CTGTGATAGG GAATATGGGT TATCAGTCCT CGGTGGGCCA ACTGGGTATG
ACAGCGTCAG CCAATAATAA TGCATCACGG CAGCTTTCTG TTTCGGCAAG CGGCAGCCTG
GTGGCTCATC AGGGCGGCGT GATAGCGGGC CCACGACTTG GCGATGCGCC TTTTGCCATC
ATCAATGCTC AGGGTGCCGG AGGGGCTAAA GTGTTTAATG GCCGCGGTGC AAAGATTGAT
AGTAATGGAT ATGCGCTGGT GCCATCACTG ACACCGTATC GGGAAAATAC CATTGCGATT
GATTATAACG ACTTGCCTGA GACAGTCGAT ATTCTGGAGA ACCATAAAGT GGTGGTCCCT
AGAATGGGCG CGATGATCCC AGTCAAGATG AAAACAATGA CAGGTAATCC GATGATGCTT
ATTGTCAGGG ATGAAAATAA AGAGTTTCTT CCTATCGGCA CTGATTTATT GGATGCGGAT
GGGGTGAGTC AAAGTATTGT TGGGCAAGGT GGAATGGCAT TTATTCGTGG ATGGGATCCT
GTATCACAAC TGCTCACTGC AACCTTAAAT GGTGGTAAAG ATAAATGTGT CATTAAACCT
GATGCGAAAA TCGATACTGC TACAAAGACA GCGCAAATAA TACAGTTGGA GGTGATATGT
CTTCGTCGCT AA
|
|---|
| Protein sequence | MPVSVVGVKI SKTGNYTILF TVSLDRYGNS NGIDEIDFRT RNRLSLSVSQ RVADNMSVNL
NSSLYSYWGN QDASQQYSVG FNHSLRSFSY TVSAIRTSNS GNSSNGDNDR EYENSYMLAV
SIPIGGSGKN KPLFSSLSTM VSHSEAGDTQ LQLTTSGSRG DQNELTYGIG TSYGNRNDAS
SEQSVIGNMG YQSSVGQLGM TASANNNASR QLSVSASGSL VAHQGGVIAG PRLGDAPFAI
INAQGAGGAK VFNGRGAKID SNGYALVPSL TPYRENTIAI DYNDLPETVD ILENHKVVVP
RMGAMIPVKM KTMTGNPMML IVRDENKEFL PIGTDLLDAD GVSQSIVGQG GMAFIRGWDP
VSQLLTATLN GGKDKCVIKP DAKIDTATKT AQIIQLEVIC LRR
|
|---|
| |