Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YpAngola_A2540 |
Symbol | sapA |
ID | 5801011 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pestis Angola |
Kingdom | Bacteria |
Replicon accession | NC_010159 |
Strand | + |
Start bp | 2657760 |
End bp | 2659406 |
Gene Length | 1647 bp |
Protein Length | 548 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641340410 |
Product | peptide transport periplasmic protein precursor |
Protein accession | YP_001606952 |
Protein GI | 162421229 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 61 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGTGGTT TACTGATTTT GCTGTTGTCG CTGATTTGCC TTGCAACCCC TGTGCTGGCA CAACCTGTTG CAGCGGAGCA ACCGCTACCG GATATCCGTC AGCGCGGATT TGTCTATTGT GTCAGTGGGA TACTCAACAC ATTTAACCCC CAAATGGCCA GTAGCGGTTT AACCGTCGAT ACACTTGCAG CACAACTCTA TGACCGTCTA CTGGATGTTG ACCCCTATAC CTACCGGTTA ATCCCAGAAC TGGCGGAAAG TTGGCAAGTT CTGGATAACG GCGCAACCTA CCGTTTTCAT TTACGTAAAG ATGTGCCATT TCAGACTACC GACTGGTTTA CGCCTACGCG GATGATGAAC GCCGATGATG TGGTCTTCAG TTTTCAGCGA GTATTTGACT CAAAGCATCC GTACCACAAG GTCAACGGCG GAGAGTACCC CTACTTTGAT AGTTTGCAGT TTGCAAGCGC CGTAAAAAGC GTAAAAAAAT TGGATGATTA CACCGTTGAA TTTAAGCTAA AAGCCCCAGA TGCGTCGTTT CTTTGGCATT TAGCAACTCA TTACGCCCCC GTATTGTCTT CAGAATACGC CGATGTCCTG ACCCAGAAAG GGAAGGAAGA ACAGATTGAC CGTGAGCCAG TCGGGACCGG GCCTTTTCTA TTGGATGAAT ATCGTTCTGG GCAATATATC CGCTTGTTCC GCAACAGCCA CTATTGGAAA GGTGTGCCAC GTATGCCACA GGTGGTTATC GACTTAGGGG TCGGTGGAAC GGGGCGTTTA TCAAAACTGT TGACCGGAGA GTGTGATGTG CTGGCCTATC CCGCCGCCAG CCAATTATCT ATTTTACGTG ATGACCCACC ACGCCTACGC CTGACACTGC GCCCTGGGAT GAACGTCGCC TATCTCGCCT TCAATACCCG CAAGCCCCCG TTAAGTGATC AACGGGTTCG CCAAGCGATC GCTTTGTCGA TCAATAACCA ACGATTGATG CAATCAATCT ATTACGGCAC AGCTGAAACG GCAGCCTCTA TTTTACCTAG AGCATCATGG GCTTATGATA ATCAGGCGCA GGTGACCGAA TATAATCCGG AAAAAGCCAA AGAGATCCTC AAAGATTTGG GGATAACCCA ACTGCAACTT AACTTATGGG TCCCTACTGC ATCGCAATCT TATAATCCTA GCCCATTGAA AACTGCTGAA TTGATCCAAG CGGATTTAGC ACAAGTGGGG ATTTCCGTCA CTATTGTTCC CGTCGAGGGC CGTTTCCAAG AGGCCCGTCT GATGGAGATG AACCACGATC TGACACTTTC CGGTTGGTCT ACTGACAGTA ATGACCCCGA CAGTTTCTTC CGGCCATTAT TAAGCTGTGC AGCAATTCGT TCGCAAACAA ACTATGCTCA CTGGTGTGAT CCGGCCTTTG ATGAATTACT GCAAAAGGCA TTACGTTCCC AACAATTATC GGAGCGTATT GAGTATTATC AGCAGGCTCA GCGTATTCTG GAGCAACAAT TGCCGTTACT GCCACTGGCA TCGTCCCTGC GGCTTCAGGC ATACCGTTAT GACATTAAAG GCTTGGTATT AAGCCCGTTC GGTAACTTTT CTTTCGCCGG TGTATACCGC GAAAGCGATG AGGGCAAGAC GCCATGA
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Protein sequence | MRGLLILLLS LICLATPVLA QPVAAEQPLP DIRQRGFVYC VSGILNTFNP QMASSGLTVD TLAAQLYDRL LDVDPYTYRL IPELAESWQV LDNGATYRFH LRKDVPFQTT DWFTPTRMMN ADDVVFSFQR VFDSKHPYHK VNGGEYPYFD SLQFASAVKS VKKLDDYTVE FKLKAPDASF LWHLATHYAP VLSSEYADVL TQKGKEEQID REPVGTGPFL LDEYRSGQYI RLFRNSHYWK GVPRMPQVVI DLGVGGTGRL SKLLTGECDV LAYPAASQLS ILRDDPPRLR LTLRPGMNVA YLAFNTRKPP LSDQRVRQAI ALSINNQRLM QSIYYGTAET AASILPRASW AYDNQAQVTE YNPEKAKEIL KDLGITQLQL NLWVPTASQS YNPSPLKTAE LIQADLAQVG ISVTIVPVEG RFQEARLMEM NHDLTLSGWS TDSNDPDSFF RPLLSCAAIR SQTNYAHWCD PAFDELLQKA LRSQQLSERI EYYQQAQRIL EQQLPLLPLA SSLRLQAYRY DIKGLVLSPF GNFSFAGVYR ESDEGKTP
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