Gene YpAngola_A2490 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2490 
Symbol 
ID5800960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2605498 
End bp2606136 
Gene Length639 bp 
Protein Length212 aa 
Translation table11 
GC content46% 
IMG OID641340364 
Producthypothetical protein 
Protein accessionYP_001606907 
Protein GI162419685 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0698] Ribose 5-phosphate isomerase RpiB 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00174175 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.0000400283 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAAAATCG CACTGATGAT GGAAAACAGT CAGGCAGGTA AAAACGCGAT AATCCTTAAA 
GAGCTGAATG CTGTTGCCTC GGAAAAAGCG TATCCGGTAT TCAACGTTGG GATGAGCGAT
GAGCAAGATC ATCATCTGAC TTATATCCAC CTGGGCATCA TGGCCAGCAT TTTGTTGAAT
GCTAAAGCGG TTGATTTTGT GGTGACCGGT TGTGGTACAG GGCAGGGCGC CATGATGTCA
TTGAATATAC ATCCAGGCGT TGTATGTGGT TATTGCATCG ATCCAGCAGA TGCTTTCCTG
TTTGCACAAA TTAACAATGG TAATGCGTTG TCACTGCCGT TTGCTAAAGG CTTTGGCTGG
GGCGCGGAAC TTAACGTGCG CTATATCTTT GAAAAAGCGT TCACTGGTGT GAAAGGCGAA
GGCTATCCAC TTGATCGTAA AGAGCCACAG GTACGTAATG CGGGTATCTT GAATCAAGTG
AAAGCGGCAG TCGTGAAAGA AAATTATCTG GATACACTAC GTGCTATCGA CCCTGAGTTG
GTGAAAACCG CCGTTAGCGG TGCACGTTTC CAGCAGTGTT TCTTTGAAAA CTGTCAGGAT
AAAGAGATTG AAGCGTTCGT GAAACAAATA CTCGCGTAA
 
Protein sequence
MKIALMMENS QAGKNAIILK ELNAVASEKA YPVFNVGMSD EQDHHLTYIH LGIMASILLN 
AKAVDFVVTG CGTGQGAMMS LNIHPGVVCG YCIDPADAFL FAQINNGNAL SLPFAKGFGW
GAELNVRYIF EKAFTGVKGE GYPLDRKEPQ VRNAGILNQV KAAVVKENYL DTLRAIDPEL
VKTAVSGARF QQCFFENCQD KEIEAFVKQI LA