Gene YpAngola_A2216 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYpAngola_A2216 
Symbol 
ID5800686 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pestis Angola 
KingdomBacteria 
Replicon accessionNC_010159 
Strand
Start bp2312429 
End bp2313820 
Gene Length1392 bp 
Protein Length463 aa 
Translation table11 
GC content50% 
IMG OID641340119 
Productputative D-arabinitol 4-dehydrogenase 
Protein accessionYP_001606664 
Protein GI162420845 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0246] Mannitol-1-phosphate/altronate dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones35 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value0.111069 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACTG ACCTGAAATC ACCCCCTGCT GTGTGGCTGC ATATTGGTGC TGGCTCCTTC 
CACCGAGCCC ATCAGGCTTG GTATTTACAC CGTTTGTTAG CCTCAGGCGA TGACCGTTGG
ACTATCGCTT TGGCCAATAT TCGTGATGAC GCCATCCCAC TACTGGACAC ATTGCGGGCG
CAACACGGTG AATATGTCTT GGAAACGGTC ACACCAAGCG GTGAACGCCA GTATGAAAAG
ATAACATCAC TGCGCAATAT CATTCCTTGG GATAAAGCGC TAGATCATCT GGTAGCGCAA
GGGAGTAAAC CCGAAACTCG CGTGATCTCT TTCACCGTAA CGGAGGGGGG CTACTATTTA
GATAATCAAT TTAATCTGCA ACAGGACAAT AGCGATATTC AGGCCGATCT TAGAGGAGAT
TGCCGCACGA TTTACGGGGC AATTAGCCGT ATCTTGCAAC AACGGCAACA GGATAAGAGT
GGCCCGGTCA CTCTACTGAA CTGCGATAAC TTGCGTCACA ACGGTGAACG ATTCCGCCAT
GGCTTATTAG AGTTTCTTGC TCTACGAGGT CAACAAAGCC TATTAAACTG GGTGACAAGC
CAGACCCGCA GCCCGAATAC CATGGTTGAT CGTATCACCC CGCGCCCATC AGCCGATATC
GCGCAGCGGG TGTTGGAAAA AACCGGTATC GTAGATAACG CTCCGGTGAT GGGGGAATCA
TTTATTCAAT GGGTTATTGA GGATGATTTT ATTGCTGGCC GCCCGGCACT GGAGAACGTT
GGGGCGGAAA TGGTCACCTC GGTTTTGCCT TATGAAGAAG CCAAAATCCG CATTCTGAAC
GCCAGCCACA GTTGTATTGC TTGGGCGGGC AGCTTGATTG GGCAATGTTA TATTCATGAA
AGTACCCAAA CCGACGCTAT CCGCCAGATG GCTTATGACT ATGTCACGCA AGATGTCATT
CCCTCCCTGA CGCCCAGCCC ACTTGATTTA GCCCATTACC GCGATGTGGT ACTGGAACGT
TTCAGTAATC CGTATATTCG CGATACGAAC CAGCGTGTCG CCGCCGATGG ATTTTCCAAA
ATCCCCGGAT TTATCACTCC CACGCTGATC GAGTGTTACC AACGTGGCGG AGTGCCTACC
GCTACCGCAA TGTTGCCCGC ATTATTCTTC GTATTTATGG AAAGTTGGCA CCAAGGCACT
CTGCCGTATG AATATCAGGA TGGTATTCTG GACCCAGCAG CCGTCCATGC CATGTTTCAG
TCTTCTGACC CTGCAGGCTT ATTTGCCCGT GATAGCGCCC TTTTCGGGCC GCTGGCCAAT
GATGATCAGT TCGAACAGTT ATTACGCCAG TCCATAAATC GTGTCTCTGC TTGGGTTAGC
ACTAACCGTT AA
 
Protein sequence
MNTDLKSPPA VWLHIGAGSF HRAHQAWYLH RLLASGDDRW TIALANIRDD AIPLLDTLRA 
QHGEYVLETV TPSGERQYEK ITSLRNIIPW DKALDHLVAQ GSKPETRVIS FTVTEGGYYL
DNQFNLQQDN SDIQADLRGD CRTIYGAISR ILQQRQQDKS GPVTLLNCDN LRHNGERFRH
GLLEFLALRG QQSLLNWVTS QTRSPNTMVD RITPRPSADI AQRVLEKTGI VDNAPVMGES
FIQWVIEDDF IAGRPALENV GAEMVTSVLP YEEAKIRILN ASHSCIAWAG SLIGQCYIHE
STQTDAIRQM AYDYVTQDVI PSLTPSPLDL AHYRDVVLER FSNPYIRDTN QRVAADGFSK
IPGFITPTLI ECYQRGGVPT ATAMLPALFF VFMESWHQGT LPYEYQDGIL DPAAVHAMFQ
SSDPAGLFAR DSALFGPLAN DDQFEQLLRQ SINRVSAWVS TNR