| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpAngola_A0782 |
|---|
| Symbol | |
|---|
| ID | 5799244 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pestis Angola |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010159 |
|---|
| Strand | + |
|---|
| Start bp | 794533 |
|---|
| End bp | 795147 |
|---|
| Gene Length | 615 bp |
|---|
| Protein Length | 204 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 641338779 |
|---|
| Product | LysE family translocator protein |
|---|
| Protein accession | YP_001605357 |
|---|
| Protein GI | 162419665 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1280] Putative threonine efflux protein |
|---|
| TIGRFAM ID | [TIGR00949] The Resistance to Homoserine/Threonine (RhtB) Family protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 0.492943 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 34 |
|---|
| Fosmid unclonability p-value | 0.203666 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTTGAAA CCTCGTTATT CGTCGCGACA CTCGCGACAT TGGGAATGAT CTCCCCCGGA
CCTGATTTTT TTCTGGTGAT CAAAAACGCT GCCCGCTATC GCCGCACTGC CGCCATGACG
ACGGCAGTTG GTGTGATTTT GGGTGTTGCT ACGCATATGT CTTATTGCGT GGCCGGTCTG
GCGGTCGTTA TCACGACCAC ACCATGGTTA TTCAATTTGC TGAAATATGC CGGGGCCTGC
TACCTGATCT GGATTGGTAT TCAAGCACTG CTGTCACGGG GAGAAAGTAA GTTTAGTATT
GATAATACTG CACAGCATCC CATCTCACTC AAAGCCGCAT TTTTGCAAGG GTACCTCTGC
AACTTATTGA ATCCCAAAGC GACTCTTTTC TTCCTCGCCG TTTTCACGCA AATACTGCAG
ATAGACTCCG GCGTAGGAGA AAAACTATGG TACGCCTCAA TCATCTGGAT ACTGGCCGCA
ATTTGGTGGC CTTTGCTGGT GATCCTGATC CAAAGCGCGC CAGTACGCCG TGGTTTAGCC
AAAACACAAA AAGTGGTCGA TAAAGTGTTA GGTGGCCTGT TGATCGGCCT TGGCATCAAA
GTCGCCTTGG GCTAA
|
|---|
| Protein sequence | MLETSLFVAT LATLGMISPG PDFFLVIKNA ARYRRTAAMT TAVGVILGVA THMSYCVAGL
AVVITTTPWL FNLLKYAGAC YLIWIGIQAL LSRGESKFSI DNTAQHPISL KAAFLQGYLC
NLLNPKATLF FLAVFTQILQ IDSGVGEKLW YASIIWILAA IWWPLLVILI QSAPVRRGLA
KTQKVVDKVL GGLLIGLGIK VALG
|
|---|
| |