| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_4122 |
|---|
| Symbol | |
|---|
| ID | 6087535 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 4555712 |
|---|
| End bp | 4557139 |
|---|
| Gene Length | 1428 bp |
|---|
| Protein Length | 475 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 641599221 |
|---|
| Product | anion transporter |
|---|
| Protein accession | YP_001722834 |
|---|
| Protein GI | 170026329 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0471] Di- and tricarboxylate transporters |
|---|
| TIGRFAM ID | [TIGR00785] anion transporter |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 31 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAATA AGATATGGAA GTTGTGTATC TTAGTAATGA TACCGCTTGT CATCTGGTTT
ATTCCACCAC CTGAAGGATT GACAGAATTA TCATGGCGTC TGTCCGGGTT CTATCTGGCT
GCTATTTGTG GCCTTATTTT AAAACCGTTT TCTGAAGCCG TTGTTTTGTT AGGCGTAGTC
GGTTTTGCGG GTTTCTTCCT TAATAACACC AGCCAAATCC TGGTCGGATA TGCAACATCA
ACGGTTTGGT TAGTATTTGC GGCATTTGGC ATTAGTATCT CTTTTGTTAA AACCGGGTTA
GGGCGACGCA TTGCATTTCA CATGATTCGC TTCTGCGGCA GTACCACGCT TAGGCTTGGA
TATGTCACCG CATTTTTAGA ATTTGTTATT TCTCCTGTGA CCCCCTCAAA TACGGCGCGA
AGTGGGGGAA TTGTATTTCC TATCATCCTG TCGGTAGTAA AAGCGTTGGG ATCAGAACCC
GGTGATACGG CAAAGAAAGC GGGCTCTTAT TTGATGTCCA ATATTTACTT TGTCATGAAG
GTCAGCAGTT TTATGTTTAT CACTGCGATG GCGCCAAATC TACTGGCTGC TGATTTCGCT
GCCAAAATTC TGGGCATTCA TCTTGACTGG GGCGTTTGGG CTCTGGCCAT GGTTGTTCCC
GGTTTGCTGT TACTGCTGAT TGTTCCCGCC GTTGGTTATT ATATTGATAA ACCAGAACTA
AAAAAAGTAG ATAACAAAAA AATTGCGGAT GAAGGTTTGG CTGAACTAGG GCCAATAACG
CGCAATGAAA AGCTTTTAGT CGGTATATTT ATTTCAGCTC TTCTGGGTTG GGCACTGCCT
TCTCTACTTG GGCAATTATT TGGCATCACA CTCAAAATCG ATGCAACAGC GGTTGCAATA
ATGGCAATGG CACTGTGTAT TTTACTGGGT GTTATCAAGT GGGATGATGT TCTTCAAAAC
AAAGGGGCTT GGAATACGTT GCTTTGGTTT GGGGGCATCA TTGGGCTGGC AAGTGCACTG
AGTAAAGAAA AAGTGTTTGA TTGGCTGGCG AATTTGATAC AGAACAATGT CGACTTTGGG
CACAATCCAT TCATAGCGTT AACCATTATC GGCTTCCTCA GTATTATCAT TCGTTATTTC
TTTGCATCTG CAAGTTCGTA TGCCATTGCT ATGCTTCCTG TTTTTCTTAC CGTAGGAAAA
GTTGCGGGTG CCGACCCCAT GGCCCTTGCA CTCGTCTTGG CCGCGACGAA CTCCTACGGT
GGTGCGTTGA CACATTATGG CGGTGGTTCA GCCCCCATCA TCTTTGGTGC CGGTTATAAC
AACGTAAAAC AGTGGTGGGC TTCTGGAGCG GTCATCGCGA CGGTATGTTT TATTGTGACA
ATGACTGTTG GTTATGTTTG GTGGCAATTC CTGGGTTTTG TTAAGTAA
|
|---|
| Protein sequence | MKNKIWKLCI LVMIPLVIWF IPPPEGLTEL SWRLSGFYLA AICGLILKPF SEAVVLLGVV
GFAGFFLNNT SQILVGYATS TVWLVFAAFG ISISFVKTGL GRRIAFHMIR FCGSTTLRLG
YVTAFLEFVI SPVTPSNTAR SGGIVFPIIL SVVKALGSEP GDTAKKAGSY LMSNIYFVMK
VSSFMFITAM APNLLAADFA AKILGIHLDW GVWALAMVVP GLLLLLIVPA VGYYIDKPEL
KKVDNKKIAD EGLAELGPIT RNEKLLVGIF ISALLGWALP SLLGQLFGIT LKIDATAVAI
MAMALCILLG VIKWDDVLQN KGAWNTLLWF GGIIGLASAL SKEKVFDWLA NLIQNNVDFG
HNPFIALTII GFLSIIIRYF FASASSYAIA MLPVFLTVGK VAGADPMALA LVLAATNSYG
GALTHYGGGS APIIFGAGYN NVKQWWASGA VIATVCFIVT MTVGYVWWQF LGFVK
|
|---|
| |