Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_4043 |
Symbol | |
ID | 6087838 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 4459917 |
End bp | 4460648 |
Gene Length | 732 bp |
Protein Length | 243 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 641599140 |
Product | pili assembly chaperone |
Protein accession | YP_001722758 |
Protein GI | 170026253 |
COG category | [N] Cell motility [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.127913 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTTAGTA TATATGCCCG CCACTATCAT TATCTGTTTG TAACTTTATT AGTGGCTATG AGTCTGTCTT TTGCTAATGC CAGTGTCGTG ATGACAGGGA GTCGCATTAT ATATCCTGCG GCGGCAAGCG AGCACAGCAT ACAGTTAACC AATAATGACA ATTTCCCTAA TGCTGTTCAG GTGTGGTTAG ACAGTGGCGA TGAAAAATCG ACACCAGAAA CAGGCAAAGC CCCCTTTATA GTGACTCCAC CGTTCTTTCG TATTGAAGCA AATTCTGGCC AAACATTACG GTTAAAATAT ACGGGAAGTG GCCTTCCTAC AGATAGGGAA TCCGTATTTT ATCTTAACTT TTTACAGATC CCTCCCGTCA ATAAAGTAGA GAAAGATAAC AAGATGTTAG TGCTGTTGCG TAACCGCATT AAAGTATTTT ATCGTCCCGA GAGTATTATC GGCCGTGTTG ACCAAGTCTC TACCGCATTG ACTTTTAGTC TACGAAAACA AGGAACTAAC CTTGTTTTGA CAGGAAAAAA CCCAACTGGA TTCTATGCCA CAATTGCCAG TGGTGAAATC GTGAGTGGGA GCATAAAACT TAAAGTAAAA TCAAATATGA TCGCGCCTAT GTCTCAAGTT GAGTGGGTGA TCCCAAATGC ATCCGTATCC TCGTCAGCAA CGATTAACTT TCTGATCATG AATGATTTCG GCGGGCAAGA TGCCGGTAGC TATCGTATTT AG
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Protein sequence | MLSIYARHYH YLFVTLLVAM SLSFANASVV MTGSRIIYPA AASEHSIQLT NNDNFPNAVQ VWLDSGDEKS TPETGKAPFI VTPPFFRIEA NSGQTLRLKY TGSGLPTDRE SVFYLNFLQI PPVNKVEKDN KMLVLLRNRI KVFYRPESII GRVDQVSTAL TFSLRKQGTN LVLTGKNPTG FYATIASGEI VSGSIKLKVK SNMIAPMSQV EWVIPNASVS SSATINFLIM NDFGGQDAGS YRI
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