Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3812 |
Symbol | |
ID | 6088513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4202740 |
End bp | 4203717 |
Gene Length | 978 bp |
Protein Length | 325 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641598904 |
Product | lysyl-tRNA synthetase |
Protein accession | YP_001722531 |
Protein GI | 170026026 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAGCGACA CGGCAAGCTG GCAGCCAAGT GCACCTATCG CCAATTTGTT GAAGCGCGCA GCAATAATGG CAGAGATTCG GCGCTTTTTC GCCGATCGGG GCGTATTAGA AGTAGAAACG CCAACCATGA GCCAAGCGAC AGTGACGGAC ATTCATTTAG TTCCATTCGA AACCCGGTTT GTTGGCCCGG GCGCTGCCGA TGGTTTGACG CTGTACATGA TGACCAGCCC GGAATATCAC ATGAAGCGGT TGTTAGCGGC GGGCAGTGGC CCTATCTATC AACTGGGCCG CAGTTTCCGC AATGAAGAGG CTGGCCGCTA TCATAATCCT GAATTCACCA TGCTGGAATG GTACCGCCCT CATTATGATA TGTATCGTTT AATGAATGAG GTGGATGACC TGTTGCAGCA AATTTTGGAT TGCAACAGCG CAGAGACCTT ATCCTATCAG CAAGCGTTTT TGCGCCATTT AAATATTGAT CCGTTGTCTG CTGAAAAAGC ACAATTGCGT GAAGTGGCGG CAAAACTGGA TTTAAGCAAT ATTGCGGATA CCGAAGAAGA TCGCGATACG TTGCTGCAAT TGTTGTTTAC TGTGGGTGTC GAACCTTATA TTGGCCGTGA TAAACCGGCA TTTATTTATC ATTTCCCGGC ATCGCAGGCA TCTCTGGCTG AAATCAGTAC CGAAGACCAC CGTGTGGCGG AACGCTTTGA GGTGTACTTC AAGGGGATAG AACTAGCGAA TGGTTTCCGA GAGCTGACTG ACGGTGATGA GCAACTGCAA CGCTTTGAGC AGGATAACCG TAACCGTGCG AAACGGGGCT TACCACAGAA CCCAATCGAT ATGAACCTTA TCGCAGCACT AAAGCAGGGT TTACCCGATT GTTCAGGTGT GGCTTTAGGG GTTGATCGCT TGGTGATGCT GGCGTTAAAT GCGGAAAGGT TGAGTGATGT TATTGCCTTC CCCGTCAATA TCGCCTAA
|
Protein sequence | MSDTASWQPS APIANLLKRA AIMAEIRRFF ADRGVLEVET PTMSQATVTD IHLVPFETRF VGPGAADGLT LYMMTSPEYH MKRLLAAGSG PIYQLGRSFR NEEAGRYHNP EFTMLEWYRP HYDMYRLMNE VDDLLQQILD CNSAETLSYQ QAFLRHLNID PLSAEKAQLR EVAAKLDLSN IADTEEDRDT LLQLLFTVGV EPYIGRDKPA FIYHFPASQA SLAEISTEDH RVAERFEVYF KGIELANGFR ELTDGDEQLQ RFEQDNRNRA KRGLPQNPID MNLIAALKQG LPDCSGVALG VDRLVMLALN AERLSDVIAF PVNIA
|
| |