| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_3666 |
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| Symbol | |
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| ID | 6087349 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 4046986 |
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| End bp | 4049631 |
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| Gene Length | 2646 bp |
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| Protein Length | 881 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 641598753 |
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| Product | Type I site-specific deoxyribonuclease |
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| Protein accession | YP_001722386 |
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| Protein GI | 170025881 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.616224 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAGCCAA ACGAGGCCAA ATACTTTGCC AACCCCGGGC TAGACGGCAA GTTTAATCCC
GACTATCAAT TTAACTGGGC CGATTTTAAT AACGAACCCA TGAACCACTG GAAAGACATC
GCCTCTACCT TGCTTTCTAT CCCTATGGCA CACCAGTTGA TTGGCTTTTA TACCGTCGCC
GACGATACCG ACGGCGTGCT TAAAGTGATG CGCAGTTATC AGTATTACGC TGCCAATGCA
ATATCTGACA AAGTGGCCAA AACCAACTGG CAGCAACTGG GTAGTGCGGC CAATAACCCT
GACCGCCTCG GTGGTTATGT GTGGCATACC ACCGGTTCGG GTAAAACCAT GACCAGCTTT
AAATCGGCGC AGTTGATTGC GCAATCGAAA GATGCCGATA AAGTGATTTT TTTAATGGAC
AGGATTGAGC TGGGCACCCA GTCGCTGGCG GAATACCGCA ATTTTGCTGG CGATGGCGAA
GACGTTCAAG CCACTGAAAA TACTCATGTA CTCATTACCA AATTAAAAAG CACCGCCCGC
GCCGATACGT TAATTGTTAG CTCTATTCAA AAAATGAGTA ATATTTTTGA AGCGGTAGAC
GATGAAGGCA CCGCCACAAA CTCTGCGGAT ATTGAAAAAA TTCGCGCTAA GCGTTTGGTG
TTTATTATCG ATGAGGCGCA CCGCTCTACC TTTGGCGATA TGCTGATTAT TATTAAACGT
ACCTTTCCGC GCGCCTTGTT TTTTGGCTTT ACCGGCACAC CGATTCAAGA AGAAAACGAA
AAAAACGGCA ATACCACCAG TACCGTATTT GGCAACGAGC TACACCGCTA CAGCATTGCC
GACGGTATTC GCGACGGCAA TGTGCTGGGC TTTGACCCTT ACAAAGTCTG TACCTTTAAA
GATAAAGATC TACGCCAGGC CGTCGCCCTT GAACAGGCTA AGGCCGATTC GGTTGCAGAT
GCAATGTCTA CGGCAGCCAA AAAGAAAAAA TTTAATTATT TTATGAATGA TGTGCCAATG
GCTGGTCATA AAGATGCAAC AGGTAAGTAT GTCAAAGGCA TAGAAGATTA TGTGCCAAAA
GAGCAATATC TCACTGAAGC CCATCAAGAA AAAGTAGTAG AAGATATTCT GGCAGAGTGG
GATGTGCTCA GCCAGGCCAA TAAGTTTCAC GCTATTTTGG CCACTAGCAG CATTGCCGAA
GCCATTGACT ATTACCGCCG TTTAAAAGCC GCCAAACCTG AACTTAAAGT ATCGGCCCTA
TTTGACCCAA ATATTGATAA CGACGGCAGC AGCGACCGTG GCCCCACCTT TAAAGGCGAT
GGCCTGGACG AAATTATGGC CGACTATAAC GCACGTTATG GCCAGGATTT TGATTTTGCC
CGCCATGCAG CCTTTAAAAA AGATTTAGCG GCACGCCTTG CCCATAAAAA GCCTTACGAG
CGCATCCATA CCGAGCCTTC AAAGCAATTA GATTTACTGA TTGTAGTGGA TCAAATGCTC
ACTGGCTTTG ACTCTAAATG GCTCAATACC TTGTATTTAG ACAAGGTGAT TAAATACCAA
AATATTATTC AAGCGTTCTC GCGCACCAAT CGCTTGTTTG GCCCCGACAA ACCCCACGGC
ATCATCCGTT ATTATCGTTA TCCACACACC ATGGAGCAGT ACATTAACGA TGCGGTAAAA
CTCTATTCCG GCGACAGACC TATCGGCTTA TTTGTTGATA GGTTAGAAAG TAACCTTAAA
GCCATAAATG AATTAGTGGC GGACATTACC GAGCTATTCG TCAGTGCGGG TGTTGAGAAC
TTTGAAAAAC TGCCAGACGA TATAGAAACC TGTGCCCAAT TCGCCAAATT ATTTAACACC
TTTAGCCAAC ACCTGGCAGC GGCTAAAGTA CAAGGTTTTC ATTGGGAACA GTCGATCTAT
TCCTTTACTG AAAATGATGT AGAACATGAG GTAACGCTGG CCATAGACGA ACAAACTTAC
CTGAGCCTGG TTCTGCGCTA TAAAGAGCTG GTAGGCAAAG GTGATGGTGG TGGCGCAGGT
GAGGGCGATG TGCCCTTTGA TATCAGTGGT TATTTAACTG AAATAGATAC CGGCAAAATC
GATGCCGACT ACATGAACAG CCGCTTTGAT AAATATTTAA AAGAGCTGAA CCAACACCAA
GACTCTGCGA ATATTGAAAC CACATTAAAT GAGCTACACA AGTCGTTTGC ATCGCTCACC
CAAAGCGAGC AAAAGTACGC CAAGCTCTTC TTGCACGACT TGCAGCGCGG CGATGCGCAG
TTAATTGAAG GCCATACTTT TAGAGACTAC ATCAACACCT ACAAAGATAA CGCTGAAAAT
GCGCAATTAA ACGCCGTTGT TAATGCTCTT GGTTTAGATA AAGAACGGCT CATAGCATTA
ATGGCTGATA GTGTTAATGA CAAGAATCTC AACGACTTTG GTCGCTTCGA CGCATTAAAA
GATTCGGTAA ATAAAGCGAA AGCCAAGATC TATTTTGAAA AACAAGACGG CGTAATCATA
CCTCCATTTA AATTGAATAT ACGTATTGAT CAGTTTTTAA AGCAGTTTAT TTTGGCACAA
ACGGATGATT TCTTAAGTGA CAGAGATGTT GTTGGTGATG TGATGGACAT CCCTCCCTCA
GCGTAA
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| Protein sequence | MEPNEAKYFA NPGLDGKFNP DYQFNWADFN NEPMNHWKDI ASTLLSIPMA HQLIGFYTVA
DDTDGVLKVM RSYQYYAANA ISDKVAKTNW QQLGSAANNP DRLGGYVWHT TGSGKTMTSF
KSAQLIAQSK DADKVIFLMD RIELGTQSLA EYRNFAGDGE DVQATENTHV LITKLKSTAR
ADTLIVSSIQ KMSNIFEAVD DEGTATNSAD IEKIRAKRLV FIIDEAHRST FGDMLIIIKR
TFPRALFFGF TGTPIQEENE KNGNTTSTVF GNELHRYSIA DGIRDGNVLG FDPYKVCTFK
DKDLRQAVAL EQAKADSVAD AMSTAAKKKK FNYFMNDVPM AGHKDATGKY VKGIEDYVPK
EQYLTEAHQE KVVEDILAEW DVLSQANKFH AILATSSIAE AIDYYRRLKA AKPELKVSAL
FDPNIDNDGS SDRGPTFKGD GLDEIMADYN ARYGQDFDFA RHAAFKKDLA ARLAHKKPYE
RIHTEPSKQL DLLIVVDQML TGFDSKWLNT LYLDKVIKYQ NIIQAFSRTN RLFGPDKPHG
IIRYYRYPHT MEQYINDAVK LYSGDRPIGL FVDRLESNLK AINELVADIT ELFVSAGVEN
FEKLPDDIET CAQFAKLFNT FSQHLAAAKV QGFHWEQSIY SFTENDVEHE VTLAIDEQTY
LSLVLRYKEL VGKGDGGGAG EGDVPFDISG YLTEIDTGKI DADYMNSRFD KYLKELNQHQ
DSANIETTLN ELHKSFASLT QSEQKYAKLF LHDLQRGDAQ LIEGHTFRDY INTYKDNAEN
AQLNAVVNAL GLDKERLIAL MADSVNDKNL NDFGRFDALK DSVNKAKAKI YFEKQDGVII
PPFKLNIRID QFLKQFILAQ TDDFLSDRDV VGDVMDIPPS A
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