Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3661 |
Symbol | |
ID | 6090935 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 4041861 |
End bp | 4042736 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 40% |
IMG OID | 641598748 |
Product | AraC family transcriptional regulator |
Protein accession | YP_001722381 |
Protein GI | 170025876 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG4753] Response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATTA AACTTATCAG TCAACTGACG GCTCTGGTAT CAGAGCCGAA TAGTATTCAC CATGTCTATT TTGCTAAAAG CCTACGCGCC GCACCATTGC TGGCACAGCA GGTTAATTTT CCTCGTATGG AGTTAATTAT CGAGGGTTCA CAAGCCATGA TATGGGATCG GCTTTATGAT GATTTTCACC ATAAAGATGA ATACATCATG CACCGTGGTG ATATTTTATT TATTCCCTCC GGGGGCTGGA ATATTCCCCA ATGGGAACAA CCGGTAATAA CGTTAAGTAT TTTATTTGGC AAGCAGAGCT TAGGTTTTAG CCTGCTAAGT TGGGATGGGG AAAGTGTTGT TCACAAAGAA ATGGAGAGTG TATTACGGCG AGGGCCACGG GTTGGGGCCT ATATTTTGCA GGCTTTAAAC GAAATGTCGT TAATGCAACG AGAGCAAACC ACTGTTCAAC TTATTGTTAG AAGCCTAATT AGCCACTGTA TCGATTTGCT TAGAAATCAG GTAAAAACGC CATCTCGCAG CCAAACGCTA TTTGAATCGA TAAGAGAATA TATTGAGAGA AATTATAGTG AACCACTGAC ACGGGAATCG GTTGCGCACG TTTTTCATAT TTCACCTAAC TACCTGTCGC ATTTATTTCG CAACGCAGGG AATATTGGAT TTAATGAGTC GGTCAACAGT GCCCGATTGG AAAATGCTAA AATATTGCTT AAGTTCTATG AAATGAAAAT CAAGGAAGTT GCAAATGTCT GTGGGTTTAT TGATAGCAAC TATTTTTGTA GGTTATTCCG TAAAGAGACT GAGTTGACAC CATCAGAATA TCGCCAACAA TATCGCAGTA ATATGATGGA AAGAGATGTT ATTTAA
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Protein sequence | MTIKLISQLT ALVSEPNSIH HVYFAKSLRA APLLAQQVNF PRMELIIEGS QAMIWDRLYD DFHHKDEYIM HRGDILFIPS GGWNIPQWEQ PVITLSILFG KQSLGFSLLS WDGESVVHKE MESVLRRGPR VGAYILQALN EMSLMQREQT TVQLIVRSLI SHCIDLLRNQ VKTPSRSQTL FESIREYIER NYSEPLTRES VAHVFHISPN YLSHLFRNAG NIGFNESVNS ARLENAKILL KFYEMKIKEV ANVCGFIDSN YFCRLFRKET ELTPSEYRQQ YRSNMMERDV I
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