Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3536 |
Symbol | |
ID | 6087754 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3887213 |
End bp | 3888304 |
Gene Length | 1092 bp |
Protein Length | 363 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641598620 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_001722256 |
Protein GI | 170025751 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGAAGA CTTATCATAT TGCAGTGTTG CCCGGCGACG GTATCGGCCC TGAAGTAATG GCTCAGGCAA GTAAAGTATT GGATGCGGTG CGTCAGCGCT TCGGTCTCAA GATTTCAACC AGTGTTTACG ATGTTGGTGG CGCTGCCATT GACCGCCATG GTAGCCCATT ACCGGCAGCA ACGGTCGCGG GATGTGAACA GGCAGATGCC ATTTTATTTG GCTCCGTAGG CGGCCCAAAA TGGGAACACC TGCCACCGGC AGAACAACCT GAGCGTGGTG CCTTATTGCC TTTGCGTAAA CATTTCAAAT TATTCAGCAA TTTGCGCCCT GCCCGTTTGT ATCAAGGATT GGAGGATTTC TGTCCATTGC GCAGTGATAT CGCGGCCAGA GGTTTTGATA TCCTGTGTGT CCGTGAATTA ACCGGCGGTA TCTATTTCGG CCAGCCGAAA GGCCGTGAAG GCCAAGGCAT GCACGAGCGG GCCTTTGACA CCGAAGTTTA TCATCGCTTC GAAATTGAAC GTATCGCCCG TATTGCTTTC GAATCAGCCC GCAAACGCCG TAGTAAAGTA ACGTCCATTG ATAAAGCCAA CGTGTTGCAA AGTTCAATCT TGTGGCGTGA AGTGGTCAAC GGGATCGCGG CGGATTACCC AGATGTTGCG TTGTCCCATA TGTACATTGA TAACGCCACC ATGCAGTTAA TCAAAGATCC TTCCCAATTT GACGTGTTGC TGTGCTCTAA CTTGTTTGGC GATATCTTGT CCGATGAATG CGCCATGATC ACCGGCTCCA TGGGCATGTT GCCATCAGCC AGTTTGAATG AACAAGGTTT TGGTCTATAT GAACCCGCAG GCGGTTCCGC ACCGGATATC GCGGGTAAGA ACATTGCCAA CCCTATCGCT CAGATCCTGT CATTAACCCT GTTGCTGCGT TTTAGCTTAG GTAAAGATGA TGCCGCTGAC GCCATTGAGC GCGCGATCAA CCAGGCATTG GAGCAAGGTT ATCGCACTGC GGATTTAGCC GGGGATGGTC ACGCAATCGG CACTCACGAA ATGGGCGATA TCATCGCTAA ATTCGTGGTT GAGGGGGTAT AA
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Protein sequence | MTKTYHIAVL PGDGIGPEVM AQASKVLDAV RQRFGLKIST SVYDVGGAAI DRHGSPLPAA TVAGCEQADA ILFGSVGGPK WEHLPPAEQP ERGALLPLRK HFKLFSNLRP ARLYQGLEDF CPLRSDIAAR GFDILCVREL TGGIYFGQPK GREGQGMHER AFDTEVYHRF EIERIARIAF ESARKRRSKV TSIDKANVLQ SSILWREVVN GIAADYPDVA LSHMYIDNAT MQLIKDPSQF DVLLCSNLFG DILSDECAMI TGSMGMLPSA SLNEQGFGLY EPAGGSAPDI AGKNIANPIA QILSLTLLLR FSLGKDDAAD AIERAINQAL EQGYRTADLA GDGHAIGTHE MGDIIAKFVV EGV
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