Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3417 |
Symbol | |
ID | 6089943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 3749742 |
End bp | 3750713 |
Gene Length | 972 bp |
Protein Length | 323 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641598501 |
Product | DeoR family transcriptional regulator |
Protein accession | YP_001722137 |
Protein GI | 170025632 |
COG category | [K] Transcription |
COG ID | [COG2390] Transcriptional regulator, contains sigma factor-related N-terminal domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.330791 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAAAGC AGATGATCCC ACAAGACAAT GAGTTGTTAA CTGAAATTGC TGTTTCGTAT TATCAGGATG AAATGACTCA GGAAGAAATC GCCCATAAAT TTGGCATTTC AAGGATCAAA GTCGGTCGCT TGCTGAAACG CGCGAAAACA GAGGGCATCG TTGAGATTAA CGTTCGTTAT CATCCGGTAT TCAGTACCCG CCTTGAGCAA CAGTTAATCG AGCATTTTGG GTTGAAACGG GCGCTGATAG CCCTTGATTA CCAAGATGAG GATGAACAAC GCCGCCAGGT CGCCGCGTTG GTTTCAGCCT ACTTAGCCAC AAACTTAAAA GACAACACGG TGTTGGCCGT TGGCCAGGGG CGTAATGTTG CGGCTATCGC AGACCACGTC AGCGTCGTGC CAGAAAGGCA CTGTAAGTTT ATCTGTGGCA TCGGTGGAAC ACACCGCCCA GGTGATGCGA TTAATGCCGA TCACATCAGT CGCCGCTTAG CCAAAAAATT TGGCGGAACG AGTGAAACCC TGTACGCACC CGCGTATGTG GAAAACCGGG CGCTAAAAGA AGCCTTTATG CAAAACGGTA CCATTAAAGA GACTCTGGAT CGCGCCCGTA AGGCTGATAT GGCTCTGGTT GGCATCGGTG ATATGAACGA AAACAGCTAT ATGGTAGAGC TGGGCTGGTT CACTCCTCAG GAGATCGTCG ACGCCAGTCT GCATCAAGGT GTGACAGGCG AAATTGCGGG ATATGATTTT TTTGATGCGC AAGGCCAACC CGCGAATACG GTGATGAATG ATCGGGTTAT TGGTATCAGC ACCCAAGAGC TTCGCCAGAT CCCCTGCGTT ATCGCTATCG CCGCTGAAAA CACCAAAGCA TTAGCGCTGC TGGGTGCCTT GCGTACCGGT GCGATCGATA TTCTTGCGAC CAGTGCATCC AATGCCCGGA CTATTTTGAA GATGATTCAA CATCAGTCGT AA
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Protein sequence | MEKQMIPQDN ELLTEIAVSY YQDEMTQEEI AHKFGISRIK VGRLLKRAKT EGIVEINVRY HPVFSTRLEQ QLIEHFGLKR ALIALDYQDE DEQRRQVAAL VSAYLATNLK DNTVLAVGQG RNVAAIADHV SVVPERHCKF ICGIGGTHRP GDAINADHIS RRLAKKFGGT SETLYAPAYV ENRALKEAFM QNGTIKETLD RARKADMALV GIGDMNENSY MVELGWFTPQ EIVDASLHQG VTGEIAGYDF FDAQGQPANT VMNDRVIGIS TQELRQIPCV IAIAAENTKA LALLGALRTG AIDILATSAS NARTILKMIQ HQS
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