Gene YPK_3290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3290 
SymbolfrsA 
ID6091353 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3600288 
End bp3601535 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content49% 
IMG OID641598367 
Productfermentation/respiration switch protein 
Protein accessionYP_001722012 
Protein GI170025507 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.110403 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCACAAG CCAACCTTTC TGAAATTCTG TTCAAACCCA AATTCAAACA TCCAGAAACC 
TCAACTCTCG TACGGCGTAC CCATTGCAAC CACGTCGTGA ATATCCATTC GGCGTTGGAT
GGTGATACCG CCAACCATTG GTATCGGATG ATTAATCGTC TGATGTGGAC TTGGCGTGGC
ATTGATCCCC TTGAAATAGA AGAGGTCTTA TCGCGTATTG CCTGTTCCAA AGCGGAGCAC
AGTAATAACG AGTTATTGGA TACCGTGGTG GGTTACCGTA ATGGTAACTG GATTTATGAA
TGGGCCAATC AGGGGATGAT GTGGCAACAA AAAGCGATGG AAGAAACCGA TCCGGGGAGC
GCAGGTCAGT TCTGGCTGAA TGCGGCTAAT TTGTACAGCA TTGCCAGTTA CCCACATCTA
AAGGGCGATG AGCTGTCGGA GCAGGCAGAG GTGCTGTCAA ACCGTGCTTA TGAAGAGGCG
GCCAAATATC TACCGTACAC CTTAAAAGAG CTGACGTTCC CCATTTCGGA TGGCGGTTCG
CTGTCAGGTT TCTTACACAT GCCTACTGTT GGCAGCGCAC CTTTCCCAAC GGTACTGATG
TGCGGTGGTC TGGATACGTT ACAAAGTGAT TACCACCGCC TATTCCGTGA TTATCTAGAA
CCCAAGGGTA TCGCGATGTT GACCATCGAC CTGCCATCTG TGGGGGCCTC ATCCCGCTGG
AAGCTCACGC AAGATACCAG TTATCTACAT CAGCAAGTGT TACAGGCGTT AGCGGATGTC
CCGTGGGTTG ACCATCAGCG CGTTAGTGTG TTCGGTTTTC GTTTTGGGGC TAACGTGGCC
GTACGTTTGG GGTATTTAGA ACCACAAAGG GTACGTGCAG TCGCATGCCT TGGGCCGATT
GTTCATCACT TGCTGTGTAA CAGCGATAGC CTACGTAAAG TGCCTGACAT GTATATGGAT
GTCATGGCTA GCCGGTTGGG TATGGCGGAT TCGACAGATG AGACGTTGAA CACCGAAATG
AACCGTTATT CGCTGAAAAC CCAAGGTTTG CTGGGGCGGC GTTGTCAGAC ACCTATGCTG
GCCGGTTTTT GGGAGAATGA CCCCTTCAGT CCAAAAGAAG AAGCTAAATT GATCTGCTCT
TCTTCTGCTG ACGGTAAGTT GTTAGCTATC CCGTCTAAAC CGCTCTATGA GAATTTCCAT
CGTGCATTAT TGCAAACCAG CGAATGGTTA GAAGATAAAA TGCGTTAA
 
Protein sequence
MAQANLSEIL FKPKFKHPET STLVRRTHCN HVVNIHSALD GDTANHWYRM INRLMWTWRG 
IDPLEIEEVL SRIACSKAEH SNNELLDTVV GYRNGNWIYE WANQGMMWQQ KAMEETDPGS
AGQFWLNAAN LYSIASYPHL KGDELSEQAE VLSNRAYEEA AKYLPYTLKE LTFPISDGGS
LSGFLHMPTV GSAPFPTVLM CGGLDTLQSD YHRLFRDYLE PKGIAMLTID LPSVGASSRW
KLTQDTSYLH QQVLQALADV PWVDHQRVSV FGFRFGANVA VRLGYLEPQR VRAVACLGPI
VHHLLCNSDS LRKVPDMYMD VMASRLGMAD STDETLNTEM NRYSLKTQGL LGRRCQTPML
AGFWENDPFS PKEEAKLICS SSADGKLLAI PSKPLYENFH RALLQTSEWL EDKMR