Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3286 |
Symbol | |
ID | 6088343 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3596192 |
End bp | 3596950 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 641598363 |
Product | YcgR family protein |
Protein accession | YP_001722008 |
Protein GI | 170025503 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG5581] Predicted glycosyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 31 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGGACAG TGAGCGAAAC GTCTAAAGAG CAATTTGTTA AAAAAAATAA ACTAGCGATC TGTGCAATTC TTCGGGATTT ACAGAAGAAC GATACTGCCG TGATGGTTAC CCATGCTCGA GGACAATTTA TTAGCCGTAT TCTGGATATA CAGCCTGAGA CTAATCAGTT TATTTTCGAT TTCGGCAGTG TAGAAAACGA AAATGTTTTG GCTCTTGGTG CGGAGCAACT CACGATTATT GTTGAACCTA CGGGTGCCAA AATTGAATTC ACCTGTAACA AGCTGAAACA TGTCGAATAT TTGTCACTAC CCGCCTTCAG TTCTGCCATC CCGGAACAGC TCTATTTCAT TCAGAGACGG GAATATTTTC GTGTCAGTAT TCCGCAATGG CCAGCTTATT ATTGTAGTGG GAAATTCCCT GACGGCACTC AGTATAAATA TACATTGGCC GACATCTCCT TGGGTGGAAT GGGTTTATAT GCCATGAAAG GTAGCGAATT TCCGCTCCAG GGATGCAGTG TTCTGCGAGA TGCAGCGGTA GATTTATGTG GTTTTGGCCT CTTTAAATTA GATCTGCAAT TTATCCGGGC GCTCGATAAA CAAGTGGTTA ATAACAAGGG CGAAACGCTG ACAGTGCAAC GTTTGAGTTT TAAATTCTTG CGCTTAAGTC CTATTCAAGA GAAAGGCTTA CAGCGAGCCA TTTTTGAACT GGAAAAACAG CAAACAGCTA AGGCGAGGAA ATTTCAGGAA GGCCTGTAG
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Protein sequence | MGTVSETSKE QFVKKNKLAI CAILRDLQKN DTAVMVTHAR GQFISRILDI QPETNQFIFD FGSVENENVL ALGAEQLTII VEPTGAKIEF TCNKLKHVEY LSLPAFSSAI PEQLYFIQRR EYFRVSIPQW PAYYCSGKFP DGTQYKYTLA DISLGGMGLY AMKGSEFPLQ GCSVLRDAAV DLCGFGLFKL DLQFIRALDK QVVNNKGETL TVQRLSFKFL RLSPIQEKGL QRAIFELEKQ QTAKARKFQE GL
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