Gene YPK_3271 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_3271 
Symbol 
ID6090465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp3575590 
End bp3577419 
Gene Length1830 bp 
Protein Length609 aa 
Translation table11 
GC content50% 
IMG OID641598348 
Productmaltodextrin glucosidase 
Protein accessionYP_001721993 
Protein GI170025488 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0366] Glycosidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTTAGTG GTTGGCACCT TCCGGTCTCG CCTTTTGTTC GTTTGGCAGA CGACGCATTA 
CATATCACGC TCTGGTTGCA AGGTGATAGT TTACCTGCGC AAGTCTTTCT GCGTTGTGAG
CCAGATAATG AAGAGTGGCT GCTCACTATG GAGGGGCATG AGAGCCATGA TCGTTGGCGC
TATAGCGTTT CTTTACCGTT ATATGAGGGG CAGCCAACCC GGCGCTACTG CTTCAAACTA
TTATGGGATG ACCACCAACA GTGGTTTGGC CCGTTGGGGT TCTCGGTGAT TCCTCCAGCA
CAGTTGGCAC AGTTTGCTGT AGATGTACCC GATAGCGGGC CTGATTGGGT CGCGGACCAA
GTTTTTTATC AGATCTTCCC CGATCGCTTT GCCAGTAGTC AGGCAGATCA TGGTGTGCAG
GAGGGGAGTT ATATTCATCA TGCGGCCGGT TGCCCGGTAT CTCGCCGTGA GTGGCAGCAG
CCATTGGATG ATGTGCATGC CGCATCGACA TTTTATGGTG GCGATCTGGC CGGTATTAGT
CAGAAAATCC CTTACTTTCA ACAACTGGGG GTTACGGCGC TGTATTTGAA CCCTATTTTT
ACCGCTCCCA GTGTGCATAA ATATGATACT GAAGATTATT ATCAGGTTGA TCCCTACTTG
GGGGGAGAGC GTGATTTCTT GCAATTGCGA GCCGCTACCC GTGAAGTAGG AATAAAGTTG
GTGCTCGATG GCGTGTTTAA CCACACGGGT GATTCTCATC GCTGGTTTGA TCGCTATCAA
CAAGGGGAAA ACGGCGCCTG CCATCACGAA GATTCGCCTT ATCGTGGTTG GTTTACGTTC
CTCCCTGATG GACGAGCATT AGATTGGAAA GGTAATGCCA GTTTGCCAAA ACTTAATTTT
GCCAATGAAG AGGTCGCTGA ACGAATCTAT CGCAGTGATG ACAGCGTCGT GCGTTATTGG
TTACGGCCAC CATACAGTAT TGATGGCTGG CGTCTGGATG TCGTACACAT GCTCGGGGAA
GATGGCGGCG CTAAAGGGAA TTTGCACCAT CTGCACGGTA TCTATCAGGC AGCAAAAGAA
GAAAATCCGC AGGCTTATAT TCTGGGCGAA CATTTTGGCG ATGCACGTAA TTGGTTGCAC
GCTGGCGTGG AAGACGCGGC AATGAATTAT ATGGGTTTTG CTTTGCCGGT CCGCAGTTTT
CTAGCCGAGC TAGATGTGGC TTGCCATCCT ATAAAATTGG ATGCTGCGGA TTGCGCCTAC
TGGATGGATG AGTACCGCGC AGGATTGCCC CATAGCCAGC AACTCCGTTT ATTTAATCAA
TTAGATAGCC ATGATACTGC CCGTTTTCTT ACCTTATTAA AGGGTGATAA AACCCGTATG
CAAATGGCGC TGATATGGTT GTTTAGTTGG ATTGGTGTGC CTTGCCTATT TTATGGTGAT
GAGATTGGGC TGGATGGCGG GAATGATCCG TTCTGCCGCA AACCGTTCCC ATGGGATGAG
GCTCAGTGGG ATCATGACCT ATTATCACTG TGTCAACGTA TGGCGGCTTT ACGCCACAAA
AGCATAGCGT TGCGGCGCGG GGGGTGTCAG GTGATCCATG CCAGTGGTGA TTCCCTGGTC
TTTATTCGTA GCTATCAAAC TGAGCGTGTG ATGGTGGCGA TACAACGTTC CGATGATGCG
GATATTTTCC TGCCCGCCTC TCCTTTACTC AATGTGGCTG AGTGGCAGCG TCTGGAAGGT
GGAGGAGACC TGGCTGTCAG TGAGACTGGG GTAAACATGG GGCTGGAGGG TAAGAGTGTT
ACCTTGTGGT GTGGTGTTGG TGAGTGCTAA
 
Protein sequence
MLSGWHLPVS PFVRLADDAL HITLWLQGDS LPAQVFLRCE PDNEEWLLTM EGHESHDRWR 
YSVSLPLYEG QPTRRYCFKL LWDDHQQWFG PLGFSVIPPA QLAQFAVDVP DSGPDWVADQ
VFYQIFPDRF ASSQADHGVQ EGSYIHHAAG CPVSRREWQQ PLDDVHAAST FYGGDLAGIS
QKIPYFQQLG VTALYLNPIF TAPSVHKYDT EDYYQVDPYL GGERDFLQLR AATREVGIKL
VLDGVFNHTG DSHRWFDRYQ QGENGACHHE DSPYRGWFTF LPDGRALDWK GNASLPKLNF
ANEEVAERIY RSDDSVVRYW LRPPYSIDGW RLDVVHMLGE DGGAKGNLHH LHGIYQAAKE
ENPQAYILGE HFGDARNWLH AGVEDAAMNY MGFALPVRSF LAELDVACHP IKLDAADCAY
WMDEYRAGLP HSQQLRLFNQ LDSHDTARFL TLLKGDKTRM QMALIWLFSW IGVPCLFYGD
EIGLDGGNDP FCRKPFPWDE AQWDHDLLSL CQRMAALRHK SIALRRGGCQ VIHASGDSLV
FIRSYQTERV MVAIQRSDDA DIFLPASPLL NVAEWQRLEG GGDLAVSETG VNMGLEGKSV
TLWCGVGEC