Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3092 |
Symbol | |
ID | 6088915 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3395350 |
End bp | 3396768 |
Gene Length | 1419 bp |
Protein Length | 472 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 641598170 |
Product | hypothetical protein |
Protein accession | YP_001721816 |
Protein GI | 170025311 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.715953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGCTTGGT ACCGGTCAGG CACAGTCACG TCAGAAGCAG CACAAAATAT AGTCACAGGA ACAGGAACTC AGTGGGCCAA TAATGTGATG GGCGTAGCGC CCGGCATGGC TTTATTTATC CCTGATTCTG CTGGAAATAC TTTGATTTAT GAAATATTAG CAGTAGATAG CAATACTCAA ATTCGCATAA ATGGCAATAT AAAAGAATCC GTGGCCGATT CCTCTTATGC AATTATGACT ACTGTATCTA ATTCATATTC AGCGCTAGCG CGTGAGACAT CAGCACAATT AGCGATGTAT CAGCAACTAC TGCAAAGCTG GCAGCAAATA TTAACGGGCA CGGGTGATGT CACAATTATA GCCCCGGATG GCACTGAGGT TGTTATTCCG TCATTTAATA GTGTAGATAG GGGTGAGTAT TTATTAAGTG TCAAATGGCA CATGAGTAGA ACTTATATTC CAGAAGGCTG GGCACCAGCT GACGGTATAA TTCTAGACAG GGCGCTATGG CCGGATGCTT GGGATGCGAT ACAAGTTGGC TATTCCCGTG TTACAGATGA ATCTTGGATT AGAGACCCGA TTCTGCGGGG TTGTTTTTCA ATAGGCAATG GTAGCACTAC ATTCAGAATT CCAGACCTTA ACGGTAAATC TGAAGGTTCA CTTGGAGCGG CATTTCTTCG CGGCGATGGT AAAAACTCAT TTGGCGAAAT AGGGAGGATT CAAGGCGATG CTATTCGGAA TATAACTGGC GATTTTGGCT CATTAGGGGG TCAAATTAAT AATGCATATG GCATTGTCAT CGGATCAAAA AATGGGGTGT TTGTAGGTCA TGGTGAGAAC GGGAGGCCAA CATCTGCAAA CATCGGGCAA CCTGCTCTGG GTTCAGAATT TGTAGCTTTT GATGCTTCAC GAGTAGTACC GACCGCAGCA GACAACCGTC CGGTCAACGC CACGGGTTGC TACATAATTA AACTCGCTGG TTCGGCACTC AACGAAGGGC AGATTAACGC GCTCGAATTA GCAACGCAGA TAACACAGCT GGCATCGCGC ACTACGGTTT TAGAATCAGA TTCTATTACG ACTAGTAAAG TAATGAATAC GCCGTGGATA TCTCCGACTT TGATTAATGG TTGGGTTAAG CCCGCTACTC GCAGATGTGC GTATAGGCGA GTTTTAGGGT TAGTGTTTGT CGAAATGACA GTAAATAGTG GTGCCTATGA TTCCACAGTA TTCACACTGC CTCCGGGGTA TAGACCTGCT ATGGAAACAA ACTCATTTGT GGCATTTGGC CAAGGTTCAA GCGGTATTTC TCCAAGGGTT TATGTTGATT TGAACGGCAA CGTAATATCG AGAAATTCAG ATGCTAACGC CACAATTGGA ATAGAAGTCT CATTCTGCTT TTCACCGGTG ATGGCATGA
|
Protein sequence | MAWYRSGTVT SEAAQNIVTG TGTQWANNVM GVAPGMALFI PDSAGNTLIY EILAVDSNTQ IRINGNIKES VADSSYAIMT TVSNSYSALA RETSAQLAMY QQLLQSWQQI LTGTGDVTII APDGTEVVIP SFNSVDRGEY LLSVKWHMSR TYIPEGWAPA DGIILDRALW PDAWDAIQVG YSRVTDESWI RDPILRGCFS IGNGSTTFRI PDLNGKSEGS LGAAFLRGDG KNSFGEIGRI QGDAIRNITG DFGSLGGQIN NAYGIVIGSK NGVFVGHGEN GRPTSANIGQ PALGSEFVAF DASRVVPTAA DNRPVNATGC YIIKLAGSAL NEGQINALEL ATQITQLASR TTVLESDSIT TSKVMNTPWI SPTLINGWVK PATRRCAYRR VLGLVFVEMT VNSGAYDSTV FTLPPGYRPA METNSFVAFG QGSSGISPRV YVDLNGNVIS RNSDANATIG IEVSFCFSPV MA
|
| |