Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_3081 |
Symbol | |
ID | 6088602 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 3387847 |
End bp | 3389610 |
Gene Length | 1764 bp |
Protein Length | 587 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641598159 |
Product | alpha/beta hydrolase fold |
Protein accession | YP_001721805 |
Protein GI | 170025300 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG2267] Lysophospholipase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCAGG AAGTGCGTTT ATTTCAAGAA GGCATGTTCA CCGCCAGCGA TGAAACATCG TTGTATTTTC GCCACTGGTC TGCCACGGAA GGTAACAGCA AGAAAGTTAT TGTGTTGTTT CATCGCGGGC ATGAACACTC GGGGCGTCTG CAACATATTG TGGATGAACT GATGATGCCC GATACCCATT TTTACGCGTG GGATGCGCGT GGACACGGGC AGTCGCCAGG GGCTCGTGGC TACAGCCCCA GCCTTGCTCG CTCGGTTTTA GACGTGGATG AGTTTGTGCG TTTTGTGGCA CAGGATGCGC AGGTCAACCT CGACGATATC GTGATGATTG CGCAAAGCGT GGGGGCCGTG CTGGTATCAA CCTGGGTTCA TGACTACGCG CCGAAAATCC GTGGCATGGT GCTGGCGTCC CCGGCATTTA AGGTCAAGCT GTATGTGCCG TTTGCCCGCC TGGGGCTGGG ATTAATGCAG CGTATACGTG GCCTGTTTTA CGTGAATTCC TACGTGAAAG GGAAATTCCT CAGCCACGAC CCCGAGCGCA TCGCCAGCTT TGAGCAGGAC AAATTAATCA CGCGCCAGAT CGCCGTCAAT ATTTTGCTCG ATCTCTACAA AACGGCTGAA CGTATTGTTT CAGACTCGAC GGCGATTACT CTCCCGACCC AGTTGCTTAT TTCCGGCGAT GATTTTGTGG TGCATGAGAA ACCGCAAAAA CAATTTTATG CCGGTCTTCG CAGCGCGATA AAAGAGCAAC ATATTCTGCC GGGTTTCTAT CACGACACGC TGGGTGAAAA AGACCGCTCT ATTGCTTTTG ATAAAATGAA AAACTTTATC GACCGACTCT ATGCAACTGC GCCTTATGCC TTTGATTATA GCCATGAAGA TCGCTGGAGT CCGAGTGCCG ATGCGTATCG TGAATTGCAG GCTCCACCAA AATCACGCTC GCTGGAAGGG ATGTTTTATG CTGCGCTAAG TTTCGGCATG AAGACCATCG GGCGACAGTC CAAAGGGATG CGCCTGGGTT ATGAAACAGG TTTTGACTCC GGCAGTACGC TGGATTACGT CTATCGTAAT CAGCCTGAAG GTAATGGCAT TCTGGGGCGT ATGATTGACC ACAACTATCT GAACAGCGTT GGCTGGCGTG GTATTCGCGT GCGTAAAGTG AATATCCAGC AGATGATTGA ACAGGCCGTT GCGAAGATTC AGCTCAGTCA CATGCCGGTG CGAGTGGTCG ATATCGCCGC CGGACATGGC CGCTATGTGC TGGATGCACT GGAAAAACAG CAGGGTATCG AAAGTATACT GCTGCGTGAT TACAGCGATT TGAATGTAGA AAAAGGTCAG GCGATGATCG AAGAGCGTGG GCTAAGCCAC GTCGCTCAGT TCAGAAAAGG CAACGCCTTC GACTATGATT CCCTTGCTAC GCTCGATCCT GCTCCGACGC TGGGCATTGT TTCCGGGCTG TATGAGCTCT TCCCGGATAA CGACTTAATC AAAACGTCGT TGGCCGGGCT GGCTGCGGCT ATTCCACCAG GCGGCATGCT GGTATACACC GGGCAACCGT GGCACCCACA GTTAAAAACC ATCGCGTATA CCTTAACCAG CCATCAAAAC GGGATCCCGT GGATGATGCG CGTGCGCAGC CAGAAAGAGA TGGACACGCT GGTGGAGCAG GCCGGCTTTG AAAAATGTCA TCAGGTGATT GATGAGTTTG GCATTTTCAC CGTGTCGCTG GCGGTGAGAA AGCAGCATGG TTGA
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Protein sequence | MSQEVRLFQE GMFTASDETS LYFRHWSATE GNSKKVIVLF HRGHEHSGRL QHIVDELMMP DTHFYAWDAR GHGQSPGARG YSPSLARSVL DVDEFVRFVA QDAQVNLDDI VMIAQSVGAV LVSTWVHDYA PKIRGMVLAS PAFKVKLYVP FARLGLGLMQ RIRGLFYVNS YVKGKFLSHD PERIASFEQD KLITRQIAVN ILLDLYKTAE RIVSDSTAIT LPTQLLISGD DFVVHEKPQK QFYAGLRSAI KEQHILPGFY HDTLGEKDRS IAFDKMKNFI DRLYATAPYA FDYSHEDRWS PSADAYRELQ APPKSRSLEG MFYAALSFGM KTIGRQSKGM RLGYETGFDS GSTLDYVYRN QPEGNGILGR MIDHNYLNSV GWRGIRVRKV NIQQMIEQAV AKIQLSHMPV RVVDIAAGHG RYVLDALEKQ QGIESILLRD YSDLNVEKGQ AMIEERGLSH VAQFRKGNAF DYDSLATLDP APTLGIVSGL YELFPDNDLI KTSLAGLAAA IPPGGMLVYT GQPWHPQLKT IAYTLTSHQN GIPWMMRVRS QKEMDTLVEQ AGFEKCHQVI DEFGIFTVSL AVRKQHG
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