| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2583 |
|---|
| Symbol | |
|---|
| ID | 6087568 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | - |
|---|
| Start bp | 2838599 |
|---|
| End bp | 2839966 |
|---|
| Gene Length | 1368 bp |
|---|
| Protein Length | 455 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 641597651 |
|---|
| Product | ImpA domain-containing protein |
|---|
| Protein accession | YP_001721313 |
|---|
| Protein GI | 170024808 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3515] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGGTA ATACCGAGCG TCTGCTGAAA ACCGGTGGCG ACCCGCGCGC ACTGGCGGAT
TTCACCGCAC TGCGGGGTGA ATTAAATAAA CTGGCCCACC CGGCCCGCCC GGATGTTGAC
TGGGCGCGGG TTGAGCAACT GTGTCTGGCG CTATTTCGCC AGAACGGCGT TGAGTTACAG
ACCGCCGTTG ATTTTACCCT GGCACGAACG CACACCGCCG GGTTGGCGGG TTTATGTGAA
GGGCTGGAAC TGTTGGCGGG GTTGGTCTGC CATCAATGGA GTGGGTTATG GCCACCGCAA
ACGCATGTCC GGGTGGCGTT ACTGGCCTGG CTGAGTGACC GGCTGCAACA AGTGTGGCGC
ACCATGACGT TATGCTACGG TGACCTGGCG CAGGTGTACC GGGCAGAGCG GGCGCTGGAA
CAGTTGTGCG CACAGTTGCA AACGCTGGAG CTCAAACATT TGTGCAAGCT GGACGGGGTT
CGTTTGATGC TGCATAACGC GGCGCAGCGG TTGGAAAGTA CCGAGGCCGT GTCTGGCCTT
GCGAAACCAC GGGGTGCCTC TGAACCGCCC GAGTCGCTGC GATTTGCCTC TGTCCCGGTC
AGTGAACCAC TGGTGTATAT TATCAGCGAA CCGGCCCCGC CACCTGTTCA GGTGGTTTTA
CCTGCCTCAC CTCCGCGCTG GAAGGCGGGC CACGGTTTTG CCGCGGGGTT ATCGTTGATG
GCGGTGCTGA TGGCCGGCAG TTTCGTTATC TGGCAGTCGG TATCATCGGA TCCCGTGAGG
GAAACATTGC TGGCCACTGC CAGTCCTTTG CCGATACCGC TGAGTGCTAA CTCAATAGCT
GAACTGAAAA AACAGGCTTC AGATGTTGAG TGGGCACGTC TGGCGGAACC GGTGTTGCAA
GCCAGTGCGA CGCAGTTAGA TCAACTGGCA CAGTTACCGC CGTTATGGGC GCAGGCTCGG
GGGGATGCCT TGCTATCTCA GGCGCAACAA CTGTGGCCCG CGAGTCAAGA GGTCAAACGG
TTGAGCACTT TGTGGCAGCA ACAGCGAGAA GCCGGTGCTG CGCCCTTGGT AGAGTTGAAA
CACTATGCAT TGGCGCAAGA CCGTTTGCGG CAACTGGCAG AACGACTGAA TAGTCTGGAT
GAGAAAAAAC GCGGATATAT GACGGTCTCC GAACTGAAAT CTGCCGTCTT TGCTATCCAA
CAGCCGCTGG CACAGGCCGT GCCACTGGAA GAACTGCTGC GGCAATATCA GGAACAATTA
GAATCAGGGC AAACTCCATC CTCAGCACTG CGTCAACAGA TTGACAGCCG GTTTAGTCAA
CTGCTGAACC GCTATGCGTT GCTGGTCGTA CCTCCTGGCG TTCAGTAA
|
|---|
| Protein sequence | MAGNTERLLK TGGDPRALAD FTALRGELNK LAHPARPDVD WARVEQLCLA LFRQNGVELQ
TAVDFTLART HTAGLAGLCE GLELLAGLVC HQWSGLWPPQ THVRVALLAW LSDRLQQVWR
TMTLCYGDLA QVYRAERALE QLCAQLQTLE LKHLCKLDGV RLMLHNAAQR LESTEAVSGL
AKPRGASEPP ESLRFASVPV SEPLVYIISE PAPPPVQVVL PASPPRWKAG HGFAAGLSLM
AVLMAGSFVI WQSVSSDPVR ETLLATASPL PIPLSANSIA ELKKQASDVE WARLAEPVLQ
ASATQLDQLA QLPPLWAQAR GDALLSQAQQ LWPASQEVKR LSTLWQQQRE AGAAPLVELK
HYALAQDRLR QLAERLNSLD EKKRGYMTVS ELKSAVFAIQ QPLAQAVPLE ELLRQYQEQL
ESGQTPSSAL RQQIDSRFSQ LLNRYALLVV PPGVQ
|
|---|
| |