| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_2303 |
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| Symbol | |
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| ID | 6087337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 2547984 |
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| End bp | 2550899 |
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| Gene Length | 2916 bp |
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| Protein Length | 971 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 641597365 |
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| Product | TP901 family phage tail tape measure protein |
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| Protein accession | YP_001721033 |
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| Protein GI | 170024528 |
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| COG category | [S] Function unknown |
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| COG ID | [COG5283] Phage-related tail protein |
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| TIGRFAM ID | [TIGR01760] phage tail tape measure protein, TP901 family, core region |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.841337 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGATA AGAACCTCCG TTTGCGGGTT TCCTTAAGTG CCATAGATAA AATCACCCGG
CCATTTAAAT CTATGTTGGC CAGCAATAAA ACGCTGGCTG CATCCATCAA AACGACGAAA
GACCAGCTTA AGCAACTCAA TGGCCAGGCG GCCAAAATTG AGGGTTTTCG TCAGAATAAA
GCCGCTGTTG ATCGTGCCGC ACAGGCGTTG ACTGCCGCCC GCAATAAAGC GCGTCAACTC
GCCACTGAAT TAAAAAACAG CGCAGCGCCT ACAGCTAAGC AGGCGAGAGA GTTTAAGCGT
GCCAGTGAAG AGGCCGCAAA ACTCAAGCAA AAGTACAATG ACTTACGTAC CGCACTCCAC
ACCCAGCGTG CCGCCTTACA AAGCAGCGGC GTTGCCACTA ATCGACTGGG ACAAGCACAG
CGAACCCTTA AAGCCAGCAT CACCAGCACC ACCGCCGCGC TGGCCGCACA ACAACGCCGG
TTAGCGCAAC AAGCCCAACA ACAGCAACGC CTGAATGCCG CCCGCAATCG CTTTGATGCC
AGCAATCAGC GCAAAGCGGT AGCTGCCGGA TTAGGGTATA CCTCGCTTGC TACCGGCCGC
GCCATGGGTC GGGGGATAAC CAAAACGTTG GGTGTGGGTT ATGAATTTGA CGCGATGATG
AGTGGAACTC AGGCAGTAAC GCGCATTGCA GATAAGAATT CTCCCGACAT GCAAGCCATG
CGCCAGCAGG CACGCACCCT TCCGCTCTCA TCCAAATTTA CCGATTTGGA AGTTGCGCAG
GGTCAGTATT ATCTTGGCCG CACTGGCTAT AGCCCTAAAC AGGTTGTCGG GGCGATGCCC
GGCCTGGTGA ATCTGGCAGC GGCGGGTGAT ATCGATCTCG GTATCACCGC CGATATTGCT
TCCAATATTC AAACCGCGAT GCGTATTCCG GCGGAGAAAA TGGATCACGT TGCCGATGTG
CTAACAGCAC TCTTCATCCG GAATAATGTC GATATCCCGA TGCTGGGTGA ATCGCTTAAG
TACTCTGCAG GTGTGGGTCG CGAATACGGC CAGAGTTTTG AAACCGTCGC CGCTTCTACC
GCCATGCTGG GGAGTGCGGG TATTCAAGGC AGTCAGGCCG GTACGGCTAT GCGCAGTATC
TTGAGCCGCA TCGGTGGCTC TAAAACCGTG AAGGATTTGG GCGTCAAAAC TGCCGATAAA
GACGGCAATA TGCGTGACCT GGTTGATATC CTCAAAGATA TCAATGAAAA AACCGGAAAG
ATGGGTAACG TTAAGCGCGG TGCAATCTAT AAAAGCATTG CTGGCCAATA TGCCGTTACC
GGCTTTGGCG TACTGATGAA CGCAGCCAGT AATGGTTCAC TGGAAAAAAT GCGCGGTAAG
CCCGGCGAAT ATGATGGTGA AGCGGCTCGT GTTGCGGCTA TAAAGCTGGA CAATATGAAG
GGCGATATGA CCATTCTCCA TGCCGCCATG GAGAATATCA GTGTTGAGTT ATTTGAGAAG
AATAACGACT GGTTACGTTC GGCGGCAAAA GGCATCAGTG AATTTATGCA CGGCGTGGCT
GAATTCCTTA AGGCCCATCC CGGCGTGAGT ACTGCGATTG TAAAAGTGGG TACCGTTGTC
GCCATTGCAA CCGCCGCATT CGGGGCGCTG GCGATTGCTG CCGTGGGTAT TTTAGGCCCC
TTCGCCCTGC TCCGTTTTAC TACCTCAGTG CTGGGGATCC GCTTATTGCC GCGCTTGTCG
TTGAGTCTGT TTCGACTGGC AAGTATCACC CCCATTACAG GTGCGCAAAT TGGCAACTTT
AGCCGCTCCC TGCTCGTGAT GTCTCAACAG GGCGGCCGCT CAGCCATCGC CAGTTTAAAA
GGGTTGGGTC AAGGTCTGGT GAACGTGGCC CGCTCGCCAG TGAAATCGGC CGTCAGTGGC
TTTACGTTAC TCGGTAATGG TATTAGCTGG CTGGCTAAAT CCCCGCTTAG GTTCCTGCGT
TTCGCGCTCG GTGGCCTGGG TAGCATGTTG GGTATCCTGA TCAGCCCGAT TGGGTTAATT
GCCGCGGCAA TCGTGGGTGC TGGCTTATTG ATTTACAAGT ACTGGCAACC GATTAAAGCG
TTCCTTGGGG GTGTGGTAGA GGGCTTTATG CAGGCCGCCG CACCGATTAA AGAGGCGCTT
AAACCGCTGG GGCCGGTGTT TGACTGGATT GGTGATGCAG TCAAAAACGT GTGGAACTGG
TTTAAAAAGT TACTGGAACC GGTGCAATCA ACCACGGCCG ATTTAAACCG CGCCGCTAAT
GCCGGTAAGG CCTTTGGTCA GTTTTTGGCT GACGGCATTG GACTGGCCAT GATACCGATA
AATGCGTTGA TCTCATCCAT TAAATGGGTA CTTGAAAAAC TGGATGAAGT AAAGCAACGC
TCTGACAAAA CCCAGGCACT GGCGCAGGCA AGCCCAGCCA CTGCCGCGGG CCCAGGTAAC
TACGGCGTGG CGTGGAAGCC AGCGCAAACG AAAACCTCCT ATATCGAAAG TAAATATACC
GGGGCATATG ATAACGGCGG CACCATCCCG CTGGGGAAAT TTGGTGTGGT AGGTGAATAT
GGCCCGGAAA TCATCAACGG CCCGGCACAA GTCACCAGCC GCCGCAACAC CGCCGCTATG
GCGGTTGCGG CTTCCATGCT ATTCAGTGGC TACCCGGCCA GCGCCGCGCC GCTCCATCCT
TACAGTTTAC CGGCGGCACA GTACCGCAGT AGCAACGGTC AGACAAATAA TCATCAGCAA
AATCAAACCA GCCATGCTGC GCCAGTTATC AATATTTACC CGACGCCGCA GCAGGATGCG
CAGGATATTG CCCGCGAGGT GGCCCGCCAA CTGGCCGCCC ACAACAGCAG GGAACAGAGC
AAATCAAACC GCAGTTATCA AGACCATGAC GACTAA
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| Protein sequence | MSDKNLRLRV SLSAIDKITR PFKSMLASNK TLAASIKTTK DQLKQLNGQA AKIEGFRQNK
AAVDRAAQAL TAARNKARQL ATELKNSAAP TAKQAREFKR ASEEAAKLKQ KYNDLRTALH
TQRAALQSSG VATNRLGQAQ RTLKASITST TAALAAQQRR LAQQAQQQQR LNAARNRFDA
SNQRKAVAAG LGYTSLATGR AMGRGITKTL GVGYEFDAMM SGTQAVTRIA DKNSPDMQAM
RQQARTLPLS SKFTDLEVAQ GQYYLGRTGY SPKQVVGAMP GLVNLAAAGD IDLGITADIA
SNIQTAMRIP AEKMDHVADV LTALFIRNNV DIPMLGESLK YSAGVGREYG QSFETVAAST
AMLGSAGIQG SQAGTAMRSI LSRIGGSKTV KDLGVKTADK DGNMRDLVDI LKDINEKTGK
MGNVKRGAIY KSIAGQYAVT GFGVLMNAAS NGSLEKMRGK PGEYDGEAAR VAAIKLDNMK
GDMTILHAAM ENISVELFEK NNDWLRSAAK GISEFMHGVA EFLKAHPGVS TAIVKVGTVV
AIATAAFGAL AIAAVGILGP FALLRFTTSV LGIRLLPRLS LSLFRLASIT PITGAQIGNF
SRSLLVMSQQ GGRSAIASLK GLGQGLVNVA RSPVKSAVSG FTLLGNGISW LAKSPLRFLR
FALGGLGSML GILISPIGLI AAAIVGAGLL IYKYWQPIKA FLGGVVEGFM QAAAPIKEAL
KPLGPVFDWI GDAVKNVWNW FKKLLEPVQS TTADLNRAAN AGKAFGQFLA DGIGLAMIPI
NALISSIKWV LEKLDEVKQR SDKTQALAQA SPATAAGPGN YGVAWKPAQT KTSYIESKYT
GAYDNGGTIP LGKFGVVGEY GPEIINGPAQ VTSRRNTAAM AVAASMLFSG YPASAAPLHP
YSLPAAQYRS SNGQTNNHQQ NQTSHAAPVI NIYPTPQQDA QDIAREVARQ LAAHNSREQS
KSNRSYQDHD D
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