Gene YPK_2260 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2260 
Symbol 
ID6087278 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2511504 
End bp2512373 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content50% 
IMG OID641597325 
Productamidohydrolase 2 
Protein accessionYP_001720994 
Protein GI170024489 
COG category[R] General function prediction only 
COG ID[COG3618] Predicted metal-dependent hydrolase of the TIM-barrel fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAACT CTTCTGCTAA CTGCCCAGTC CCATTCGATA TTATGGAACC TTCGATTTTT 
GCGCTACCCG AAGATGCATG TGATAGCCAC GCACACGTTA TCTCCCCTCG CGCTATCTAC
CCCATGGTGG CGGAACGCAG TTATACCCCG CCACCAGCAC CTGAAGAGAA ATACCTATCC
ATGCTTGCAG CAACAGGTAT GAGCCGAGGT GTCTTGGTAC AGATCAGCGT TTATGGTTCA
GATAACCGTT ACATGCTTAA GGTACTGAAA CGGCATCCGG AATATTTACG CGGTGTGGCA
GTAGTGACGG AAGATGTCAC CGACCAAGAA TTGCAAGACA TGGCATTGGC CGGTGTTAGA
GGGCTACGCA TCAACGTGCT GTTCGGGGGA GGAATCGGTT TCGATGCCAT GGAAAATTTA
GCATCAAAAA TAGCGCCCCT GGGCTGGCAC ATGCAGTTCC TGATGGATGT ACGACAGCTC
CCGGCACTGA TACCACGAAT GAAAAAACTG CCTTGTCCGT GCGTCATCGA CCACATGGGA
CATATGCCTG TGTCATTGGG ACTCAATCAC CCAGGCTATC AGACATTGTT GCATATGGTC
AGAGAATATG GATGGTGGGT AAAATTATCA GGAGCCTATC GTATCAGTGA ATCATGGCAA
GACGGCTATC TCGATGTCGT GCCTTTTGCA CAAAAGCTTA TCGAAACCGC ACCTGACCGC
ATGGTCTGGG GAAACGACTG GCCACATGTC TCGGTATCTC GAATGCCAGA TACTGGAGGA
TTACGCAATT TGCTCGCCGC TTGGGTACCC GATGAGCAGG TGCGCAACCG GATCTTGGTC
GATAACCCTG CTCGTCTATA TGATTTTTAA
 
Protein sequence
MKNSSANCPV PFDIMEPSIF ALPEDACDSH AHVISPRAIY PMVAERSYTP PPAPEEKYLS 
MLAATGMSRG VLVQISVYGS DNRYMLKVLK RHPEYLRGVA VVTEDVTDQE LQDMALAGVR
GLRINVLFGG GIGFDAMENL ASKIAPLGWH MQFLMDVRQL PALIPRMKKL PCPCVIDHMG
HMPVSLGLNH PGYQTLLHMV REYGWWVKLS GAYRISESWQ DGYLDVVPFA QKLIETAPDR
MVWGNDWPHV SVSRMPDTGG LRNLLAAWVP DEQVRNRILV DNPARLYDF