Gene YPK_2223 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_2223 
Symbol 
ID6088342 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2463580 
End bp2464386 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content49% 
IMG OID641597288 
ProductN-formylglutamate amidohydrolase 
Protein accessionYP_001720957 
Protein GI170024452 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3741] N-formylglutamate amidohydrolase 
TIGRFAM ID[TIGR02017] N-formylglutamate amidohydrolase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0797472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATTTAA CTGACTCTTA CTACTTTCAG GGCGGAAAAA TACCTTTGCT CATTAGCATT 
CCACATGCAG GTACACGCCT GACTCCCGCA GTTGAAGCTG GCCTGACAGC AGCAGCACAG
CCTTTATCCG ATACAGATTG GCATATCCCT CGTCTCTATG ACTTTGCCCG TGAGATGGGC
GCCAGTGTTT TAATCGGCCA GTATTCCCGC TTGGTGGTCG ACCTTAACCG ACCGCAAGAT
GACCAACCAC TCTATGCTAC TGCGACCACC GGGCTATTCC CCGAAACACT GTTTGATGGG
CGCGCTTGTT TTGAAGCAGG TAAAACACCT TCACCAAATG AGCGGCAATC CTACTTAACG
CATATCTGGC AGCCTTATCA TCAGCGGCTT CAGCAAGAAC TTGCCAGATT AAGTGCGCAA
TTTGGCTATG CACTCCTTCT AGACGCACAC TCTATTGCGT CCGTTATTCC TCGGTTATTT
GATGGGCAAC TTCCTGATTT GAACATCGGC ACTAACGACA ATGCCAGTTG CCTACTTTCG
TTAACTGAAC AGCTCATTGC GCGCTGCCAG CGTCAAACGG CATTCAGCCA CGTACTCAAT
GGCCGTTTTA AAGGCGGGTA TATCACTCGC ACATATGGAT TACCACAAAA CCACCACCAT
GCGGTGCAAC TAGAATTAGC GCAGTTAAAC TATATGTCGG AGACCGAGCC TTACGCTTAT
CGGCCTGATC GAGCCATTCA TTTACAGCAA TTGCTCCAGC AGTTCATCAC AACCATGCTG
ACGTGGGGTG AGCAAACTTA CCGTTGA
 
Protein sequence
MNLTDSYYFQ GGKIPLLISI PHAGTRLTPA VEAGLTAAAQ PLSDTDWHIP RLYDFAREMG 
ASVLIGQYSR LVVDLNRPQD DQPLYATATT GLFPETLFDG RACFEAGKTP SPNERQSYLT
HIWQPYHQRL QQELARLSAQ FGYALLLDAH SIASVIPRLF DGQLPDLNIG TNDNASCLLS
LTEQLIARCQ RQTAFSHVLN GRFKGGYITR TYGLPQNHHH AVQLELAQLN YMSETEPYAY
RPDRAIHLQQ LLQQFITTML TWGEQTYR