Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2119 |
Symbol | |
ID | 6088187 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 2349746 |
End bp | 2350831 |
Gene Length | 1086 bp |
Protein Length | 361 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641597187 |
Product | lytic murein transglycosylase |
Protein accession | YP_001720858 |
Protein GI | 170024353 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2951] Membrane-bound lytic murein transglycosylase B |
TIGRFAM ID | [TIGR02283] lytic murein transglycosylase |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.0387524 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAGGGT CAGTTACGGC AGTCATATTG GCGACAGCCA TCTCCTTTGG TTGCGTCAGT AAAAACGCTA AGGCTCTCGT GGCGGGGGGT ACCTCGCCAC GGTCAACATC AAAATCTATG TTAACCCCAG GGGCTACGGC TAGCAGTACC CCCACGATGT TATCTCAGCA AGGGCGTGAT CCGTCTCAGT TTCCAGCTTA TGTTGAGCAG TTAAAAGCGC AAGCCAGGGC TAAAGGCTAT ACAACCGAGA CCTTGGATAC GGCTTTTGCT AATATTCATT TTGTCGATCG AGTCATCAAA TCAGACCGTA ATCAATTAGA AAAGAAAATC ACGCTGGATG ATTATCTAAC CAGAGTACTT CCGCGAAAGA GAATTGAGCA GGGTAGAGCA CTTTATCAAC GTTACCAGCC GCAGTTATCT CAGGTGAACG CACAATATGG TGTCCCTGGG CGGTATATTG TCGCGCTCTG GGGTATGGAA AGTGCTTTTG GTCAAATTCA AGGTAAAGAA GATGTGATTT CCGCTTTATC TACCTTGGCT TTTGAAGGGC GTAGGGAAGC TTTTTTTACC AAAGAACTGA TGGCTGCGTT GGAAATTATT CATCAAGGGA AGGTTGACGA CCCCCAATTG AGAGGATCTT GGGCGGGGGC GATGGGGCAA AGTCAGTTTA TGCCCAGCTC TTTCCTGACG TATGGTGCTG ACGGTGATAG TGATGGAAAA GTTGATATTT GGAATAATAT TGATGATGTA TTTGCTTCTA CTGCTAATTA TCTGTCTACT CAAGGTTGGA AATCTGAACA GGGATGGGGC CAGGAAGTCA CGTTACCGCA AGATTTTAAT GTGAAATTGG CGGGGTTGGA CGATGGGCAA GCCAAGAGCG TTGCCCAATG GCAGAAACTG GGTATCACGC CGGTACAAAA CGCGCACTTT GCTGAATCTG CTGCGCGTGC CTGGGTGATC ATTCCTGATG ATCTAAAGGG GCGTGCTTTT CTGGTTTATG ACAATTTCCG GACGATCATG CATTGGAATC GCTCTTACTA TTTCGCTATT AGCATTGGTA TGATGGCCGA TAGTATCGGT CAATAG
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Protein sequence | MKGSVTAVIL ATAISFGCVS KNAKALVAGG TSPRSTSKSM LTPGATASST PTMLSQQGRD PSQFPAYVEQ LKAQARAKGY TTETLDTAFA NIHFVDRVIK SDRNQLEKKI TLDDYLTRVL PRKRIEQGRA LYQRYQPQLS QVNAQYGVPG RYIVALWGME SAFGQIQGKE DVISALSTLA FEGRREAFFT KELMAALEII HQGKVDDPQL RGSWAGAMGQ SQFMPSSFLT YGADGDSDGK VDIWNNIDDV FASTANYLST QGWKSEQGWG QEVTLPQDFN VKLAGLDDGQ AKSVAQWQKL GITPVQNAHF AESAARAWVI IPDDLKGRAF LVYDNFRTIM HWNRSYYFAI SIGMMADSIG Q
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