Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_2017 |
Symbol | |
ID | 6088010 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2247186 |
End bp | 2249252 |
Gene Length | 2067 bp |
Protein Length | 688 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641597084 |
Product | carbon starvation protein CstA |
Protein accession | YP_001720757 |
Protein GI | 170024252 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG1966] Carbon starvation protein, predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.121466 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAATAACA TCAGGACCGT TGTCATATGG CTGACAGTGG CGCTAATCGG TGCATTTGCC TTTGCCATGT TGGCCCTTAG CCGGGGTGAA CATGTCAATG CCATCTGGTT AGTGATTGCA TCCGTGGCTT GTTACAGCAT CGCTTATCGC TTCTACAGTC GGTTTATTGC CAAGAATGTC TTTGAACTGG ATGACCGTCG TCTGACGCCA GCAGAACGAC GCAATGACGG TCTGGATTAT GTTCCTACCA ACAAATGGGT GTTGTTTGGT CACCACTTTG CTGCCATCGC GGGTGCTGGG CCACTGGTCG GGCCAATCTT GGCCGCACAG ATGGGTTTTC TGCCGGGGAC TATCTGGATC CTGGTCGGTG TAATGATGGC CGGTGCCGTA CAGGACTTCT TAATCCTGTT TATCTCCACT CGCCGCGATG GCCGCTCACT GGGTGAAATG GCAAAGCAAG AGTTGGGGGC ATTTGCTGGT GTGATAACTA TGCTGGGTGC ATTGGGCGTA ATGATTATCA TTTTGTCCGC ACTCGCACTG GTGGTGGTAA AAGCATTAGC TGATAGCCCG TGGGGCCTGT TTACCATTGC CGCAACGATC CCCATAGCCC TCTTTATGGG CGTCTATATG CGGTTTATCC GCCCTGGTAA AATTGCTGAA GTATCATTAA TCGGTTTCGT ACTGATGATG TCTGCAATCA TTTACGGTGG GAACATCGCG GTACACCCTT ACTGGGGGCC TTTCTTTACG TTACATGGCA CCACGCTAAC CTGGATATTG GTTATCTATG GTTTCATCGC CTCTGTACTG CCAGTGTGGT TGCTATTGGC ACCACGAGAT TACTTATCAA CCTTCCTGAA AATTGGGGTC ATCATTGGTT TAGCGGTTGG TATTGTATTC GCCATGCCAG AAATGAAGAT GCCCGCGGTC TCACGCTTTA TTGATGGCAG CGGCCCGGTA TTCTCCGGCA GCCTGTTCCC GTTCCTGTTT ATTACTATCG CTTGTGGCGC TATCTCGGGC TTCCATGCTC TGGTATCCAG TGGCACCACA CCGAAACTGA TTGAACGCGA AAGCCATACC CGCTTTATCG GCTACGGCGC AATGTTGATG GAGTCATTCG TTGCCATCAT GGCGCTAATC TGTGCCTCGG TTATCGACCC TGGTGTTTAT TTCGCCATGA ACTCACCCGC GGCTCTGATT GGTACCACCG TAGAAAGTGC CTCGCTGGCC ATTAGTAGCT GGGGGTTTGT CGTTACGCCA GAAACACTGG CGATGGTCGC CAAAGATGTT GGTGAAAACT CGATTCTGTC ACGGGCTGGT GGTGCACCGA CCTTCGCTGT GGGCATGGCG CATATCATCA GTGAAATATT CAATAGCCGT AATATGATGG CTTTCTGGTA TCACTTTGCC ATCTTGTTTG AAGCCATGTT TATTCTGACT GCGGTCGATG CTGGTACCCG TGCCTGCCGC TTTATGGTTC AGGATCTGGT TGGGGTGGTC GTACCTCGTC TGGCCAATAA CCGTTCATGG TTTGGTAACC TTTCCGGAAC GACAGTCGCG GTAGCCGGTT GGGGATTCTT CGTTTACCAA GGTGTTATCG ATCCACTGGG GGGAATAAAC ACCTTGTGGC CGCTGTTCGG TATTGGTAAC CAAATGCTGG CATCAATGGC ACTGATTCTA GGTACCGTCG TACTGTTTAA AATGAAGAAA CAACGCTACG CCTGGGTCAC CATCCTGCCA ACAATTTGGT TATTTATCAC CTCAATGACC GCAGGTTGGC AGAAGATATT CCATGAAAAA CCAAGTATTG GCTTCCTTGC TCAAGCAAAA AAATTCTCTA ACGGCATTGA ACAAGGGGTG TTAATCGCAC CCGCGAAGAG CTTTAAAGAC ATGGAAACTA TCGTGTTTAG CAACCAGATC AATGCCGCGC TATGTGCATT CTTTATGCTG GTGGCGGTGA CGATGCTAGT TTCTGCCTTC TTTGTGATTC GTCGCGCACT GAAATCCAGC AAACCAACAA CCCATGAAAC TGAAATTGTA TACCGTGAGG AGGTCGCCCG TGGTTAA
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Protein sequence | MNNIRTVVIW LTVALIGAFA FAMLALSRGE HVNAIWLVIA SVACYSIAYR FYSRFIAKNV FELDDRRLTP AERRNDGLDY VPTNKWVLFG HHFAAIAGAG PLVGPILAAQ MGFLPGTIWI LVGVMMAGAV QDFLILFIST RRDGRSLGEM AKQELGAFAG VITMLGALGV MIIILSALAL VVVKALADSP WGLFTIAATI PIALFMGVYM RFIRPGKIAE VSLIGFVLMM SAIIYGGNIA VHPYWGPFFT LHGTTLTWIL VIYGFIASVL PVWLLLAPRD YLSTFLKIGV IIGLAVGIVF AMPEMKMPAV SRFIDGSGPV FSGSLFPFLF ITIACGAISG FHALVSSGTT PKLIERESHT RFIGYGAMLM ESFVAIMALI CASVIDPGVY FAMNSPAALI GTTVESASLA ISSWGFVVTP ETLAMVAKDV GENSILSRAG GAPTFAVGMA HIISEIFNSR NMMAFWYHFA ILFEAMFILT AVDAGTRACR FMVQDLVGVV VPRLANNRSW FGNLSGTTVA VAGWGFFVYQ GVIDPLGGIN TLWPLFGIGN QMLASMALIL GTVVLFKMKK QRYAWVTILP TIWLFITSMT AGWQKIFHEK PSIGFLAQAK KFSNGIEQGV LIAPAKSFKD METIVFSNQI NAALCAFFML VAVTMLVSAF FVIRRALKSS KPTTHETEIV YREEVARG
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