Gene YPK_1979 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1979 
Symbol 
ID6089120 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp2198672 
End bp2199952 
Gene Length1281 bp 
Protein Length426 aa 
Translation table11 
GC content52% 
IMG OID641597048 
Productputative voltage-gated ClC-type chloride channel ClcB 
Protein accessionYP_001720721 
Protein GI170024216 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGGC CAATCCATCT CTATTACTAC CGTGCGATGC TGCGTCGATT AGTGATCTCC 
ATCATGCTCG GCATGGTATC CGCGCTCATC GTTTGGCTGT TTCATCAGGC GATGCTGGGG
CTGGAGTGGC TGCTCTTCTC ACGAACAGAT GGTAGCCTGG TTGCTGCTGC GGCCTCTATT
ACTGGGTGGC GGCGGGCATT AACTCCTGCT TTGGGGGGAT TGGCGGCAGG TTTGCTGTTA
TGGGCATACC AACGTTATCA ACACCGTAAA CCCAGTGCGC CCACTGATTA TATGGAAGCC
ATTGAAATCG GTGATGGCCG ATTAGATGTT TCCGCCAGCC TAGTGAAGTC CCTCGCCTCT
TTGTTAGTCG TATCCAGCGG CAGTGCCATT GGTCGTGAAG GCGCTATGGT ATTGTTGGCC
GCCCTGTTCG CTTCGGGTTT CGCTCAACGC TATGCAAAAC CTAAAGAGTG GAAGTTGTGG
GTCGCCTGTG GGGCCGCTGC GGGAATGGCA AGTGCTTACC ATGCTCCGTT GGCTGGCAGC
CTGTTTATTG CAGAAATTCT ATTTGGAACA CTGATGTTGG CTTCACTCGG CCCGGTAGTG
ATCGCCGCGG TCAGTGCGTT ATTGACGACC AACTTGCTAC AAGGTGGTCA GGAAACCCTT
TATCAAGTGC AGACACTCCC TTCTCCTTGG CCGGTACAAT ATTTCCTGAT GGCGCTTCTA
GGATTAATGG CGGGCTTCAG CGGCCCTTTA TTTTTAAAAG CGATGGCGGC TAGCAGTCAT
GCTTTCCGCT CCCTGAATTT ATTGCCACCT CTGCAATTGG CGCTGGGGGG GATAATTGTT
GGTTTACTAT CATTGATATT TCCAGAGGTC TGGGGCAATG GCTACAGCGT AGTGCAATCA
CTCCTCACCA CGCCGCCGGG GGTGTTACTG ATAGGCGGCA TATTGATCTG TAAGTTATTG
GCCGTGCTTG CCAGTAGTGG GTCCGGCGCT CCGGGAGGGG TATTTACACC TACATTGTTT
GTCGGTGCCG CACTCGGCAT GTTATGTGGG CAGATATTTT CTTTGTGGCC CGTGCTGGGC
GACAATATTG GGTTATTAAT GGCACTGACC GGCATGGCAA CATTACTGGC AGCAACGACC
CATGCGCCCA TTATGGCCGC TTTAATGGTT TGTGAAATGA CCGGCGAGTA CACCTTATTG
CCAGGGCTAT TATTATCTTG TGTTATCGCG ACAACAATAG CCCGCTGGTT GCGCCCAATA
TCGGTATATC GGTCTCACTA A
 
Protein sequence
MKRPIHLYYY RAMLRRLVIS IMLGMVSALI VWLFHQAMLG LEWLLFSRTD GSLVAAAASI 
TGWRRALTPA LGGLAAGLLL WAYQRYQHRK PSAPTDYMEA IEIGDGRLDV SASLVKSLAS
LLVVSSGSAI GREGAMVLLA ALFASGFAQR YAKPKEWKLW VACGAAAGMA SAYHAPLAGS
LFIAEILFGT LMLASLGPVV IAAVSALLTT NLLQGGQETL YQVQTLPSPW PVQYFLMALL
GLMAGFSGPL FLKAMAASSH AFRSLNLLPP LQLALGGIIV GLLSLIFPEV WGNGYSVVQS
LLTTPPGVLL IGGILICKLL AVLASSGSGA PGGVFTPTLF VGAALGMLCG QIFSLWPVLG
DNIGLLMALT GMATLLAATT HAPIMAALMV CEMTGEYTLL PGLLLSCVIA TTIARWLRPI
SVYRSH