Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1979 |
Symbol | |
ID | 6089120 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 2198672 |
End bp | 2199952 |
Gene Length | 1281 bp |
Protein Length | 426 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 641597048 |
Product | putative voltage-gated ClC-type chloride channel ClcB |
Protein accession | YP_001720721 |
Protein GI | 170024216 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAACGGC CAATCCATCT CTATTACTAC CGTGCGATGC TGCGTCGATT AGTGATCTCC ATCATGCTCG GCATGGTATC CGCGCTCATC GTTTGGCTGT TTCATCAGGC GATGCTGGGG CTGGAGTGGC TGCTCTTCTC ACGAACAGAT GGTAGCCTGG TTGCTGCTGC GGCCTCTATT ACTGGGTGGC GGCGGGCATT AACTCCTGCT TTGGGGGGAT TGGCGGCAGG TTTGCTGTTA TGGGCATACC AACGTTATCA ACACCGTAAA CCCAGTGCGC CCACTGATTA TATGGAAGCC ATTGAAATCG GTGATGGCCG ATTAGATGTT TCCGCCAGCC TAGTGAAGTC CCTCGCCTCT TTGTTAGTCG TATCCAGCGG CAGTGCCATT GGTCGTGAAG GCGCTATGGT ATTGTTGGCC GCCCTGTTCG CTTCGGGTTT CGCTCAACGC TATGCAAAAC CTAAAGAGTG GAAGTTGTGG GTCGCCTGTG GGGCCGCTGC GGGAATGGCA AGTGCTTACC ATGCTCCGTT GGCTGGCAGC CTGTTTATTG CAGAAATTCT ATTTGGAACA CTGATGTTGG CTTCACTCGG CCCGGTAGTG ATCGCCGCGG TCAGTGCGTT ATTGACGACC AACTTGCTAC AAGGTGGTCA GGAAACCCTT TATCAAGTGC AGACACTCCC TTCTCCTTGG CCGGTACAAT ATTTCCTGAT GGCGCTTCTA GGATTAATGG CGGGCTTCAG CGGCCCTTTA TTTTTAAAAG CGATGGCGGC TAGCAGTCAT GCTTTCCGCT CCCTGAATTT ATTGCCACCT CTGCAATTGG CGCTGGGGGG GATAATTGTT GGTTTACTAT CATTGATATT TCCAGAGGTC TGGGGCAATG GCTACAGCGT AGTGCAATCA CTCCTCACCA CGCCGCCGGG GGTGTTACTG ATAGGCGGCA TATTGATCTG TAAGTTATTG GCCGTGCTTG CCAGTAGTGG GTCCGGCGCT CCGGGAGGGG TATTTACACC TACATTGTTT GTCGGTGCCG CACTCGGCAT GTTATGTGGG CAGATATTTT CTTTGTGGCC CGTGCTGGGC GACAATATTG GGTTATTAAT GGCACTGACC GGCATGGCAA CATTACTGGC AGCAACGACC CATGCGCCCA TTATGGCCGC TTTAATGGTT TGTGAAATGA CCGGCGAGTA CACCTTATTG CCAGGGCTAT TATTATCTTG TGTTATCGCG ACAACAATAG CCCGCTGGTT GCGCCCAATA TCGGTATATC GGTCTCACTA A
|
Protein sequence | MKRPIHLYYY RAMLRRLVIS IMLGMVSALI VWLFHQAMLG LEWLLFSRTD GSLVAAAASI TGWRRALTPA LGGLAAGLLL WAYQRYQHRK PSAPTDYMEA IEIGDGRLDV SASLVKSLAS LLVVSSGSAI GREGAMVLLA ALFASGFAQR YAKPKEWKLW VACGAAAGMA SAYHAPLAGS LFIAEILFGT LMLASLGPVV IAAVSALLTT NLLQGGQETL YQVQTLPSPW PVQYFLMALL GLMAGFSGPL FLKAMAASSH AFRSLNLLPP LQLALGGIIV GLLSLIFPEV WGNGYSVVQS LLTTPPGVLL IGGILICKLL AVLASSGSGA PGGVFTPTLF VGAALGMLCG QIFSLWPVLG DNIGLLMALT GMATLLAATT HAPIMAALMV CEMTGEYTLL PGLLLSCVIA TTIARWLRPI SVYRSH
|
| |