| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1790 |
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| Symbol | |
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| ID | 6088264 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1988236 |
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| End bp | 1989039 |
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| Gene Length | 804 bp |
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| Protein Length | 267 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641596858 |
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| Product | pili assembly chaperone |
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| Protein accession | YP_001720534 |
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| Protein GI | 170024029 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3121] P pilus assembly protein, chaperone PapD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0241556 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACGT TATGGCTAAT CCTCAGGCCG CGTGCCCGTA AGGTGAATAA TCTGCGTACT
TTACTGATTA CGGCTATTTT AAGCAGTTTG GTGTTGAGTG CTACGGTTCA AGCCGGTGTG
GCGATTGGTC TGACACGGGT GATAGTGACC GGTGCTGATA AATCCGGCAG TGTGCAGATC
CTCAATGACG GCCTTCATCC AGCGTTGCTG CAACTCTGGG TGGATAATAA TATCGCTGAA
ATGGATAAGC CCATTGAGCA GATAAACGTC CCGTTTGTGG TTGATAGCCC GGTATTCCGC
CTTAACGCCA AGACCAATAA ATCTATCCGT ATTTATTATA CCGGAGGCGC TAATCAGTTG
CCGTCTGACC GTGAATCTAT GTTTTGGCTT AATGTGTTGG AAGTGCCGCC CAAAGCGTCT
GCAAATCAAT CATCACAAAA TGCGGTACAA ATCGCTTTTC GCTCACGTAT TAAATTATTT
TACCGCCCGG CAGGAATACC GATCAGTTCA GAAGGTGTAG CAACTAAGTT GTCTTTCACT
CTGGTACCTA AAGGGGAGGG CCGTGTATTA CGCGTGGCTA ATCCGACGCC ATTCAATGTC
ACATTCCAGA CATTGGCTAT CGCCCAAAGT CATACCGCGC AGGGCGTCAC TATCAAACTG
GGCGCTGATG ATATGGTGGG GCCAAAAAGC AGCGTGGACA GTGCCCCAGT GGGCAACAAC
GCGCTGGCGA AGAATATGAG TGTGTTTTTC ACCATTATTG ATGATTTTGG CTCACCCATT
GAAGGGCAGC AGCCACTACA ATAA
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| Protein sequence | MKTLWLILRP RARKVNNLRT LLITAILSSL VLSATVQAGV AIGLTRVIVT GADKSGSVQI
LNDGLHPALL QLWVDNNIAE MDKPIEQINV PFVVDSPVFR LNAKTNKSIR IYYTGGANQL
PSDRESMFWL NVLEVPPKAS ANQSSQNAVQ IAFRSRIKLF YRPAGIPISS EGVATKLSFT
LVPKGEGRVL RVANPTPFNV TFQTLAIAQS HTAQGVTIKL GADDMVGPKS SVDSAPVGNN
ALAKNMSVFF TIIDDFGSPI EGQQPLQ
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