| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1681 |
|---|
| Symbol | |
|---|
| ID | 6087540 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Yersinia pseudotuberculosis YPIII |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010465 |
|---|
| Strand | + |
|---|
| Start bp | 1868584 |
|---|
| End bp | 1869108 |
|---|
| Gene Length | 525 bp |
|---|
| Protein Length | 174 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 641596751 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001720427 |
|---|
| Protein GI | 170023922 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1399] Predicted metal-binding, possibly nucleic acid-binding protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 3 |
|---|
| Plasmid unclonability p-value | 0.0000000242559 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAAAAGG TAAAATTACC CCTGACCATT GATGCGGTCC GTACCGCTCA GAAACGTTTA
GATTACGCAG GTATCTATTC GCCTGAGCAG GTTACACGAG TGGCCGACTC TGTGGTAAGT
GTGGACAGCG ATGTCGTGGC CTCATTATCG TTTAATATTG ATAATCAGCG TCTGGCGGTT
ATTACAGGTC ATGCAGACGT CGATGTAACA TTGATGTGTC AGCGCTGTAA TGGCACGTTT
GCACACCATG TTCATACAAC GTATTGTTTC AGCCCGATCG TCAATGATGA GCAGGCTGAA
GCATTACCGG AAGCGTACGA GCCGATCGAA GTCGATGAAT TTGGCGAAGT CGATCTGCTG
GCTATGATTG AAGACGAAAT TATTCTTTCA CTGCCTGTCG TTCCGGTACA TGATTCTGAA
CACTGTGAAG TGTCCGAGGC GGACATGGTA TTTGGTAAAC TGCCTGCAGA GGTAGAGAAA
CCCAATCCAT TTGCCGTATT AGCCAGTTTA AAGAAAAGTA ATTAA
|
|---|
| Protein sequence | MQKVKLPLTI DAVRTAQKRL DYAGIYSPEQ VTRVADSVVS VDSDVVASLS FNIDNQRLAV
ITGHADVDVT LMCQRCNGTF AHHVHTTYCF SPIVNDEQAE ALPEAYEPIE VDEFGEVDLL
AMIEDEIILS LPVVPVHDSE HCEVSEADMV FGKLPAEVEK PNPFAVLASL KKSN
|
|---|
| |