| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_1504 |
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| Symbol | |
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| ID | 6089804 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 1664564 |
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| End bp | 1665790 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 641596574 |
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| Product | cytochrome c-type biogenesis protein CcmI |
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| Protein accession | YP_001720250 |
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| Protein GI | 170023745 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | [TIGR03142] cytochrome c-type biogenesis protein CcmI |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.00909547 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTTTTT GGCTGATAGT CATCATTTCG TTGGCGGTTG CAGGGGCCTT ATTGGTCATT
CCGGTCATCC GAAAAAATGA AAATAAGCGG GTTACCACCA GGGATGAGCT GAATAAGGCT
ATTTATCGTG ATCGGTTATC TGAATTGGCC GAAGATGAAG CGCAGGGCGT GATCGCAGAA
CGGCCTGAAC TGGTTAAAGA GCTGCAACAA AACTTGCTGA CAGATATCCC GCAGCAGTTG
GGAGAAGTAA AAAACCCGAT CAATCGCTGG GTATTATTGC CCGGAGTCGT GGTATTGGTG
GCGGTAGCGG TCGGGTTGTA CCTAAAAACC GGCGGTTTAG AGCAGGTCGC GGCATGGCAT
CAGGTTGCTG CGCAAATGCC TGAATTACGT GCTCGGGTTG CCAACGAACA TGCCGATCCA
TTAAGTATGG AGGATGTGGC CCGCTTGGGG CTCGGTTTAC GTACCTCTCT GCAACAGGAT
GCTGGTAACG TCAATGATTG GATGATGTTG GGCCGAGTAG GGATGACGCT CAATAATGCC
ACCACCGCAA CACAGGCTTT TGCGCACGCT TATCAACTCG CGCCCGATAA TAATGAGGTT
AAACTCGGGT ATGTCGAAGT ACTCACCCGA TCCAATGATC CAGAAGATAA CCAATTGGCG
ACACAGATGT TGCGTGCAAT GGTGGGGCAA GACCATACGA ATTTACGTGC GATGAGTTTA
TTGGCTTTTA ATGCTTTTGA GCAGGGTGAT TTCAAACAAG CGATAGCCGC GTGGGAAGTT
ATGCTAAAAT TGTTGCCGGC TAGCGATTCA CGTGTAGACG TGGTAAAACG CAGTATTCAG
CAAGCCAAAT CACAGATAGA GCAAGAAACA GCTACACTGG GAATTGAGGT TTCGCTATCC
TCTGATGCGG CGCAAGCATT ACCCCAACAA GGGGCACTGA TTATCTCTGT GACCAATGGC
ATAAATCCGG TACCGGTTGC TGTAAAGCAA CTGCCATTGA GCAGATTCCC GCTAGCGGTT
ACGCTGGATG ACAGCAATGC AATGATGCCA GAACGTTTGC TCTCTTCTTT ACAGCAGGTG
AAAGTACGTG TACGCCTCTC TTTGGATGGG GCCGCGAATG CGCAGTCTGG CGACTGGTAC
GGTGAGAGCG CGGTGCAGGA TTTCAAAGGC AATGGGCCGT CGAGTGAGCA AAAAATAGGC
GTTCAAATAA ATAAACAAAT CCCTTAA
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| Protein sequence | MAFWLIVIIS LAVAGALLVI PVIRKNENKR VTTRDELNKA IYRDRLSELA EDEAQGVIAE
RPELVKELQQ NLLTDIPQQL GEVKNPINRW VLLPGVVVLV AVAVGLYLKT GGLEQVAAWH
QVAAQMPELR ARVANEHADP LSMEDVARLG LGLRTSLQQD AGNVNDWMML GRVGMTLNNA
TTATQAFAHA YQLAPDNNEV KLGYVEVLTR SNDPEDNQLA TQMLRAMVGQ DHTNLRAMSL
LAFNAFEQGD FKQAIAAWEV MLKLLPASDS RVDVVKRSIQ QAKSQIEQET ATLGIEVSLS
SDAAQALPQQ GALIISVTNG INPVPVAVKQ LPLSRFPLAV TLDDSNAMMP ERLLSSLQQV
KVRVRLSLDG AANAQSGDWY GESAVQDFKG NGPSSEQKIG VQINKQIP
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