Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1406 |
Symbol | |
ID | 6091046 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 1549134 |
End bp | 1550012 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 641596470 |
Product | RpiR family transcriptional regulator |
Protein accession | YP_001720153 |
Protein GI | 170023648 |
COG category | [K] Transcription |
COG ID | [COG1737] Transcriptional regulators |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | GTGAAAACTG GTGCTCCCCG CTTTAAGCCA GGTAAAATTC TTGATGCCTT GGGTGCGATG CAAAATAGCC TGACTCGTTC TGCTCAGCGT ATTGCTGCGT ATATTTTGGC GCAACCGGCT CAGGTTACCC AATTATCTAT TGCTGATCTC TCGGCACTCA CACAGGCCGG TGAAGCGACC ATTATTCGTT TCTGTCGGAC ACTGGGTTAT AAAGGGTTTC AGGATTTCAA AATGGACCTG GCCATTGAAG TGGCCACCCG CCATAACAGT GAAAACAGCC TGTTAGATGC CGATGTCCAA GAGGGTGACG ATACGCTGGC GATCGGCAGC AAATTACAAT CCGCTATCAA TAATGTTTTA TCTGAAACAC TTAATTTGCT TTCTATTGAG AGTGTTGAAC AGGTGGTCAA ATTGCTGCGT CCTGCGGATC GCATCTGTAT TTTTGGTGTT GGCTCCTCGG GGATCACTGC GGAAGATGCC AAAGGCAAAC TAATGCGCAT CGGCCTGCGG GTTGATGCTG CGACAAATAA TCACTTCATG TATATGCAAG CCTCTCTTAT GAACCCTGGT GATGTTGCCA TTGGTATCAG TCATTCGGGG ACCTCGGCTG AAACTGTGCA GGCCCTCAAA TTGGCAAAAG AGGCTGGGGC GACGACAGTG GCGTTGACGC ATAATATGGG GTCACGGATC ACTGAATTAG CCGATTATGT CCTGATCAAT GGTAACCGGC AGGGGCAATT GCAGGGGGAC TCCATCGGTA CAAAAATCGC ACAATTGTTT GTGTTGGATC TGATTTACGC CTTATTGGTC AAAGCTGATC CGGCGCAGGC GGAGAGTATT AAACGCAAAA CAACCCAAGC GGTTAGCCAA AATGGATGA
|
Protein sequence | MKTGAPRFKP GKILDALGAM QNSLTRSAQR IAAYILAQPA QVTQLSIADL SALTQAGEAT IIRFCRTLGY KGFQDFKMDL AIEVATRHNS ENSLLDADVQ EGDDTLAIGS KLQSAINNVL SETLNLLSIE SVEQVVKLLR PADRICIFGV GSSGITAEDA KGKLMRIGLR VDAATNNHFM YMQASLMNPG DVAIGISHSG TSAETVQALK LAKEAGATTV ALTHNMGSRI TELADYVLIN GNRQGQLQGD SIGTKIAQLF VLDLIYALLV KADPAQAESI KRKTTQAVSQ NG
|
| |