Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_1179 |
Symbol | |
ID | 6090518 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1314163 |
End bp | 1315488 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 641596247 |
Product | ATP-dependent RNA helicase SrmB |
Protein accession | YP_001719930 |
Protein GI | 170023425 |
COG category | [J] Translation, ribosomal structure and biogenesis [K] Transcription [L] Replication, recombination and repair |
COG ID | [COG0513] Superfamily II DNA and RNA helicases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGTAA CCAATTTTTC CGAACTCGAT CTCGATGAAC GTCTGATTGA CGCACTGCGC GACAAAGGCT ATGAGCGTCC TACGGCTATC CAGGCTTCGG CGATCCCGCC GGCTATGGAT GGGCGTGACG TATTAGGTTC GGCTCCAACA GGTACCGGCA AAACTGCCGC CTTTTTGCTG CCAGCCTTGC AGCATTTGCT GGATTTCCCC CGCAAAAAAT CCGGGCCACC GCGGATCCTG ATCCTGACGC CAACCCGTGA GTTAGCCATG CAAGTGGCAG ACCAAGCCCG TGAACTGGCA AAGTATACTC AGTTGGATAT CGCCACAATA ACCGGCGGCG TGGCATATAT GAACCATGCC GAAGTCTTCA GTGAGAATCA GGATGTTGTC GTTGCCACGA CAGGCCGCCT GCTGCAATAC ATCAAAGAAG AAAACTTTGA TTGTCGTGCG GTAGAGACCC TGATCCTGGA TGAAGCTGAC CGTATGCTGG ACATGGGTTT TGCCCAAGAT ATTGAAACCA TCTCAGCCGA AACCCGCTGG CGTAAGCAAA CACTGCTGTT CTCTGCCACT CTTGAAGGTG AAGCCATCCG CGAATTTGCG GAGCGCATTC TCAATGAGCC AGTAGAACTT GAGGCCGATC CATCGCGCCG CGAACGCAAA AAAATTCAGC AATGGTACTA CCGGGCTGAC GACATCAAGC ATAAGACAGC GTTACTTTGT CATCTGCTGA AACAGCCCGA TGTCTCGAAG TCCATCATTT TTGTTCGTAC CCGCGAGCGT GTCCATGAGT TAGTCAGTTG GCTACGTGAG GCGGGCATTA ATGCCTGGTT CCTTGAAGGC GAAATGGTAC AAGCTAAACG TACCGAAGCG GTCATTCGCT TGGGTGATGG CCGGGTAAAT GTGCTGGTTG CCACCGATAT TGCCTCACGC GGGTTGGATA TTGATGATAT CAGCCATGTA TTCAACTTTG ATATGCCACG CACCGCCGAT GTTTATTTAC ATCGTATTGG CCGTACTGGC CGTGCTGGCC GCAAAGGCGT CGCCATTTCC TTGGTTGAAG CTCATGATCA TATCTTGTTA GGCAAAATTG GCCGTTATCT TAACGAACCA CTGAAACCAC GCGTTATTGA TGAGTTGCGC CCAACGAGCA AGGCACCAAG TGAAAAAGCG ACGGGTAAAC CCTCTAAAAA GGTTTTAGCG AAGCGTAAAG AACAAAAAGA AGCCAGCAAA GAGAAAGTAA AGGTTAAGGT TCGTCATCGT GATGCCAAAA ACGTTGGTAA GCGGCGTACA CCAAAAGCAA AACCTGATAC CAAGAGTGCT GGTTAG
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Protein sequence | MTVTNFSELD LDERLIDALR DKGYERPTAI QASAIPPAMD GRDVLGSAPT GTGKTAAFLL PALQHLLDFP RKKSGPPRIL ILTPTRELAM QVADQARELA KYTQLDIATI TGGVAYMNHA EVFSENQDVV VATTGRLLQY IKEENFDCRA VETLILDEAD RMLDMGFAQD IETISAETRW RKQTLLFSAT LEGEAIREFA ERILNEPVEL EADPSRRERK KIQQWYYRAD DIKHKTALLC HLLKQPDVSK SIIFVRTRER VHELVSWLRE AGINAWFLEG EMVQAKRTEA VIRLGDGRVN VLVATDIASR GLDIDDISHV FNFDMPRTAD VYLHRIGRTG RAGRKGVAIS LVEAHDHILL GKIGRYLNEP LKPRVIDELR PTSKAPSEKA TGKPSKKVLA KRKEQKEASK EKVKVKVRHR DAKNVGKRRT PKAKPDTKSA G
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