Gene YPK_1137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagYPK_1137 
Symbol 
ID6090440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameYersinia pseudotuberculosis YPIII 
KingdomBacteria 
Replicon accessionNC_010465 
Strand
Start bp1275313 
End bp1276278 
Gene Length966 bp 
Protein Length321 aa 
Translation table11 
GC content48% 
IMG OID641596205 
Producturease accessory protein UreD 
Protein accessionYP_001719888 
Protein GI170023383 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0829] Urease accessory protein UreH 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAGCAC AGAGCCAGAA TATCGTGGAG ACGCCTTCAC GGGTTCGCGC TCACGCATTA 
GGTGTTAACG CGCCGGAATT AGCGAAATAT CAGGATGAAC CGGCGCAAAT GCGTAGCGGG
GCGGTTGGAA AAAGTGGCTA TCTGAAACTG AGATTTGCCA AACGTGAACA TCGCAGTATT
TTGGCCGAAA TGGAAAGGCG GGTGCCCTCA TTGGTACAAA AAGCACTGTA CTGGGATGAG
GAAATACCTG AGTTACCTTG TGTCACCATG ATTTCGACAT CAGGTTGTAT TTTGCAGGGT
GATCGGTTAG CTACTGATGT GCATGTGGAA GCGGGCGCTT GTGCTCACGT CACCACGCAG
TCAGCCACAA AAGTTCACAT GATGAATGCG AACTACGCCT CGCAGATCCA GAATTTCATT
GTGGAGGAAG GCGGTTATCT GGAATTTATG CCAGACCCGC TAATTCCTCA TCGAAATTCC
CGTTTTATTA CTGATACCAC GATCAGCATT CATCCAACTG CGACCGCGAT TTATTCTGAA
GTGCTGATGT CCGGGCGTAA ATATCACCAT GCTGACGAGC GATTCGGTTT TGATGTTTAT
TCCTCTCGGG TGGCAGCACA AAATCTGGCG GGCAAAGAGT TGTTTGTTGA GAAGTACGTA
TTAGAACCAA AAGTAGAAAG CCTTGACGCG GTGGGTGTTA TGCAAACCTT TGATGCGTTT
GGTAACGTGA TTTTATTAAC GCCCAAAGAA CATCATGACC GCATTCTGGC ACGGGTTCCG
GCTCATTTTG ACATCAAAGG GGGGATTGCC AGCGGTGCGA CGCGTCTACC TAATGATTGT
GGATTAGTCT TCAAGGCGTT GGGTATTGAT AGCGCGGGTG TAAAGGCAGA GATTCGCCAA
TTTTGGAAGA TAGCCCGCGA AGAGATTTTA GGCGTCACAT TGCCTGAACA ATTTTTGTGG
CGCTGA
 
Protein sequence
MTAQSQNIVE TPSRVRAHAL GVNAPELAKY QDEPAQMRSG AVGKSGYLKL RFAKREHRSI 
LAEMERRVPS LVQKALYWDE EIPELPCVTM ISTSGCILQG DRLATDVHVE AGACAHVTTQ
SATKVHMMNA NYASQIQNFI VEEGGYLEFM PDPLIPHRNS RFITDTTISI HPTATAIYSE
VLMSGRKYHH ADERFGFDVY SSRVAAQNLA GKELFVEKYV LEPKVESLDA VGVMQTFDAF
GNVILLTPKE HHDRILARVP AHFDIKGGIA SGATRLPNDC GLVFKALGID SAGVKAEIRQ
FWKIAREEIL GVTLPEQFLW R