Gene YPK_1135 details

Gene Information

• Locus tag: YPK_1135
• ID: 6090602
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Yersinia pseudotuberculosis YPIII
• Kingdom: Bacteria
• Replicon accession: NC_010465
• Strand: +
• Start bp: 1273841
• End bp: 1274527
• Gene Length: 687 bp
• Protein Length: 228 aa
• Translation table: 11
• GC content: 49%
• IMG OID: 641596203
• Product: urease accessory protein UreF
• Protein accession: YP_001719886
• Protein GI: 170023381
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0830] Urease accessory protein UreF

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAACGCAT CAGATCTCAT TCGTATCATG CAATTTGGTG ATTCCGTACT GCCGGTCGGG 
GCCTTTACGT TTTCCAATGG CGTGGAATCT GCCATTCAAA CCGGCATCGT TCATGATGTA 
GCAACATTGA AAGGCTTCGT TTTGACCGCG TTGAAGCAGG CGGCCAGTTG TGACGGTATG 
GGCGTTGTCG CAGCTCATCG TGCTGTTGTG GCAGATGACC GTGATGGCAT TATCCGTGCT 
GATTGGGCGG TTAATAATCG TAAGTTAAAT GAAGAAAGCC GCCTGATGGC AACCCGCATG 
GGTAAAAAGC TGGCAGAAAT GTCGATTCAT GTGGTGGAGC ACCCATTGAT CAGTTGGTGG 
TTGGAACAAA TCAAAAATGG CAACACGGCG GGCACCTATC CGGTGACTCA AGCGGTGGTT 
ATGGCAGCAC AAGGGATCGG GCAGCGGGAA GTGGTTGTGA TGCATCAATA CGGTGTGGCA 
ATGACCATTT TAAGTGCGGC AATGCGCTTG ATGCGCGTTA CGCATTTCGA TACACAGCAT 
ATCTTATTTG AACTGAACCA TGACATTGAG AAATTCTGCG ATATTGCCGA AATCGGCGAT 
ATCAACCAGA TGTCTTCTTA TGTCCCGATT GTGGATGTTT TGGCCGCCGT ACATGTGAAA 
GCCCATGTTC GCCTCTTTAG TAACTGA 

 

Protein sequence

MNASDLIRIM QFGDSVLPVG AFTFSNGVES AIQTGIVHDV ATLKGFVLTA LKQAASCDGM 
GVVAAHRAVV ADDRDGIIRA DWAVNNRKLN EESRLMATRM GKKLAEMSIH VVEHPLISWW 
LEQIKNGNTA GTYPVTQAVV MAAQGIGQRE VVVMHQYGVA MTILSAAMRL MRVTHFDTQH 
ILFELNHDIE KFCDIAEIGD INQMSSYVPI VDVLAAVHVK AHVRLFSN