Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0882 |
Symbol | |
ID | 6089921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | - |
Start bp | 1008807 |
End bp | 1009748 |
Gene Length | 942 bp |
Protein Length | 313 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 641595944 |
Product | integrase family protein |
Protein accession | YP_001719636 |
Protein GI | 170023131 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4974] Site-specific recombinase XerD |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCATATG AGCAATTCAT TATGAATGAA TCTGCAAATA AGCCTTGGAT GGGTGATAAA CCAGATACCC GATGCCTAAA AGAATTAACT GACCTATGGT TTGCTTTACA TGGACGCTCA CTTTCCTCTG GAGATAAGAT TCACAGCAAA CTGAGATTGG TTGCAGATGC ATTAGGTGAT CCAATAGCTG TAAATTTCAC GGCAAAGGAC TTCGCCCATT ACCGCAACAA AAGACTGACA GGTGAAATAA AACTAGATGA GCGCTTTGTT AAAGGCTCTA GCCCTGTAAC CATAAATCTA GACCATTCAT ATCTCAGCGC TATGTTTGAA GAATTGATAC GTTTGGAAGA ATGGAAATTA CCTAATCCGC TTGAAAAATT GCGTAAATTT ACGATTAGTG AAAGAGAAAT GGCGTGGCTT GACATTGATC AGATTAATGA GCTTTTGGCG GCTACAAGTC ATCATATTGA TATGAATCGT GTTATCCGGG TTTGTCTATG TACCGGGGCG CGCTGGAGTG AGTCACAGTT TTTAACAAAG AATCAATTAA GCCCAAACAA AATTACCTTT ACTAAAACCA AGGGCAAAAA AAATAGAACG GTACCTATTT CTGCTGATTT TTATGAAGAG CTGAAAGAGA TTAAAAGTGA GCGGTTATTT GGTGACTGTT ACTACCCTTT CTTAACCATT TTGAATAACT CATCAATTGT TTTACCAAAA GGGCAGTTAA CACATGTTCT CAGACACTCA TTTGCGGCGC ATTTTATGAT GAATGGCGGC AACATTTTGG TACTTCAAAA GATACTCGGA CATCATGATA TAAACATGAC TATGCGTTAT GCCCATTTCG CACCTGAGCA TTTAGATACA GCAGTAACGT TTAACCCCCT CGCCATGGTA AATAATGGCG GCAAATTGGC GGCAAAAAAT GGTACTCACT AG
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Protein sequence | MAYEQFIMNE SANKPWMGDK PDTRCLKELT DLWFALHGRS LSSGDKIHSK LRLVADALGD PIAVNFTAKD FAHYRNKRLT GEIKLDERFV KGSSPVTINL DHSYLSAMFE ELIRLEEWKL PNPLEKLRKF TISEREMAWL DIDQINELLA ATSHHIDMNR VIRVCLCTGA RWSESQFLTK NQLSPNKITF TKTKGKKNRT VPISADFYEE LKEIKSERLF GDCYYPFLTI LNNSSIVLPK GQLTHVLRHS FAAHFMMNGG NILVLQKILG HHDINMTMRY AHFAPEHLDT AVTFNPLAMV NNGGKLAAKN GTH
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