| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0682 |
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| Symbol | |
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| ID | 6088670 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 743093 |
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| End bp | 744379 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641595743 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001719436 |
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| Protein GI | 170022931 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 0.667296 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTGTCC CTTTAAAAAT ACAAGAGTTA ATGCGCGAAA GAATGTTAGC CAATATTGAC
ATTAATAAAG TTGAACTCCT GGTTGGTGAT CGTAACAAAC TTATCGGATT GCTCTCTCAA
ACATTCGATG ATTTATTTAA TAACAATGAA TATAACTTAA CGACTCAAGC ACAAAAATAT
ATTATTGAAA TGATAGCTGA TGAAATAACC GGCTTTGGCC CATTAAGAGA ACTAATGGAG
GATGACTCCA TTAGTGATAT TATGGTCAAC GGCCCAGAAA GAATATTCAT CGAAAGATAT
GGCCTGTTAA AATTAACTGA TCGGCGGTTT GTTAATAATA CTCAGCTCAC CGATATCGCA
AAGCGTTTAA TGCAAAAGGT TAATCGACGC ATTGATGAAG GCCGCCCATT AGCAGATGCC
CGTTTAATCG ATGGTAGCCG AATAAACGTC GCGATCAGCC CCATTGCTTT AGATGGTACT
GCCCTTTCTA TCCGTAAATT CAGTAAAAAT AAACGGAGAT TAGAAGATTT GGTCGATATG
GGAGCCATGA GTAGTGATAT GGCAAATTTC CTAATTATTG CTGCCAGTTG CCGTGTAAAT
ATTATTATTT CCGGAGGTAC AGGTTCAGGG AAAACCACGC TATTGAATGC GCTTTCAAAA
TATATTTCAG AAGATGAGCG GGTGATAACA CTCGAAGATG CTGCGGAACT GAATCTGGAG
CAACCCCATG TGGTCAGGAT GGAAACCCGT CTGGCGGGAC TGGAGAATAC CGGCCAGATA
ACCATGCGCG ATCTGGTGAT TAACTCCCTG CGTATGCGCC CTGACAGGAT CATTATTGGT
GAGTGCCGGG GTGAGGAAAC CTTTGAAATG TTGCAGGCGA TGAACACTGG CCATAACGGT
TCAATGTCCA CCCTACATGC CAATACTCCC CGTGATGCTG TCGCCCGTTT AGAAAGCATG
ATTATGATGG GGCCGGTTAA TATGCCTCTC ATTACCATCC GCCGTAATAT TGCATCTGCA
ATTAATCTTA TTGTCCAAGT CTCGCGTATG AATGATGGCT CGCGAAAAAT CCGCAATATC
AGCGAGATCA TGGGAATGGA AGGTGAACAT GTTGTTTTAC AAGATATATT TACTTTCCAA
CCCGCCAGTA CTCGTGATGA TAAAGGGCGT ATTCAGGGTG AGTTTATCAA CCATGGGCTA
TTTAATCGAT CATCAGTCAG AATAAATGCC GATATCCATA ATCTGGCCAA TGAGTTAAAC
AGTGTTTTCT CTACGGTGAG CAAATGA
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| Protein sequence | MIVPLKIQEL MRERMLANID INKVELLVGD RNKLIGLLSQ TFDDLFNNNE YNLTTQAQKY
IIEMIADEIT GFGPLRELME DDSISDIMVN GPERIFIERY GLLKLTDRRF VNNTQLTDIA
KRLMQKVNRR IDEGRPLADA RLIDGSRINV AISPIALDGT ALSIRKFSKN KRRLEDLVDM
GAMSSDMANF LIIAASCRVN IIISGGTGSG KTTLLNALSK YISEDERVIT LEDAAELNLE
QPHVVRMETR LAGLENTGQI TMRDLVINSL RMRPDRIIIG ECRGEETFEM LQAMNTGHNG
SMSTLHANTP RDAVARLESM IMMGPVNMPL ITIRRNIASA INLIVQVSRM NDGSRKIRNI
SEIMGMEGEH VVLQDIFTFQ PASTRDDKGR IQGEFINHGL FNRSSVRINA DIHNLANELN
SVFSTVSK
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