Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | YPK_0485 |
Symbol | |
ID | 6090245 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Yersinia pseudotuberculosis YPIII |
Kingdom | Bacteria |
Replicon accession | NC_010465 |
Strand | + |
Start bp | 537035 |
End bp | 538990 |
Gene Length | 1956 bp |
Protein Length | 651 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641595547 |
Product | p-hydroxybenzoic acid efflux subunit AaeB |
Protein accession | YP_001719241 |
Protein GI | 170022736 |
COG category | [S] Function unknown |
COG ID | [COG1289] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCACC CAAGCTTTAT TCGCCTGCGG TTTGCGTTCA AGCTGAGTTT TGCCATTGTG GCGGCATTAT TTCTTGGCTT TCATCTGCAA TTGGAAACAC CGCGTTGGTC AGTGCTTACT GCCGCTATTG TTTCCGCCGG GCCTGCCTTC GCTGCAGGTG GCGAACCTTT CTCTGGTGCG ATTCGCCACC GAGGTTGGTT ACGGATTATC GGCACCTTTA TCGGCTGTAT TGGGGGGCTG GTCATTATTG TGCTGACCAT CAGAGCGCCA GTATTAACGT TGATGCTGTG TTGCCTATGG GCTGGGATCT GTACGTGGAT TTCATCGCTG GTACGGGTAG AAAATTCGTA TGCGTTCGGT TTGGCCGGTT ATACCGCGTT AATCATCATT GTCACCACCG GTGAAACGCC ACTACTGACG CCGCAATTTG CGGTTGAGCG CTGTAGCGAA ATTGTCCTCG GGATCGTCTG TGCGGTGATG GCAGATCTGC TGTTTTCACC CCGCTCGATC AAACAGGATA TTGATCGATT GGTCGACAAG GTGTTAGTGG ATCAGTACCG GCTCTTACAA CTCTGCATTC AGCCAGCAGA AAAAAGTGAG ATTGATCGCG CTTGGAATGA ATTGGTTAAA AATACCACGT CACTCAATGG GATGCGCAGC TATCTGATGA TGGAGTCTTC CCGTTGGCAG CGGTGTAATC GCCGTTTGCA GGTGTTACAT ACCGAGTCTT TGGCGCTGAT CACGCAGGCG TGTGAAACCT ATCTGGTGAT GAGCAATCAC CCAGAGGTGA TCAGTGCTGA ACTGAAAACT ATGCTGAGCG AACCCGCTCA AACTCCTGCA GAGATCCACC AGCAGATGAA AAAACTGCGT CAGTTTATTG CTGCCAGCCA CAGTGAGGCG ATCCCGCACA CCATCAGCAG TTGGGTTGGG GCAGCGACTC GCTATTTATT ACTGTCGAAA GGGATCCAGA CCAACAGCAG CATCAATCAG GTCGAAGAGG ATATTTTGGC GGGTGATGCG CCGGTTAAGC CCATTTCTGC CGAAGGCCAT CATGCGATGA TCAATGGCTT GCGTACCGGT ATTGCCACGG CGATTGGTGG CCTGTTCTGG CTGTGGACCG GCTGGACATC CGGCGCGGGG TGTATGGTGA TGATTGCAGT GGTCACTTCG CTGGCGATGC GAACACCGAA TCCACGGAGG ATGGCGCTCG ATTTTCTGGT CGGCGTGATT ATCGCACTGC CCATCGGGGC GCTTTACTTT ATGTTTATTA TCCCGTCGAC CCAGCAAAGT ATGCTGTTGC TTTGTATCAG CTTGGGTGTG CTGGCATTTA TTATCGGCAT CGAAGTACAA AAACGGCGCT TGGGTTCACT GGGAACGCTG GCTAGCACCA TAAATATTAT CGTGCTAAGT AATCCAATGA TATTTAATGT CCGCCAGTTT CTCGATAGCG CATTAGGTCA AATTGTAGGC TGCTTTGTCT CTTTAATTGT CCTGCTGTTG ATCCGTGACA ACGCGAAGGA CAGAACGGGC AGAACCTTAC TCAACCGTTT TGTTTACAGT GCGGTCTCGG CCCTAACCAC CAATAAAACC AAGCGCGGCG AAAATCATCT ACCCGCGCTG TATCAGCAAC TGAACCAGTT ATTGATGATG TTCCCGGCCG ATATTGATAA ATATCGTCTG GCATTAACGC TGATTATTGC TCACCAGCGG TTAAACAGGA CTGAAATCCC GGTGAATGCG GAGTTGAGCG CTTTTCATAA ACAGATCCGC TCTACCGCAG AGCGAGTGAT TACTGTCAAC AATGACCAGA AACGGCGTTA TTATTTTGCC CGGTTATTGC AGGAACTGGA TCAATATCAA CAGAAATTGG TGGATTATCA GGCTGCTGAT GCGGTTATCC GCCCGGTTAA GCGGTTGACT GAGATGTTGC GTAAATATCA GAGTGCGCTG ATTTAA
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Protein sequence | MTHPSFIRLR FAFKLSFAIV AALFLGFHLQ LETPRWSVLT AAIVSAGPAF AAGGEPFSGA IRHRGWLRII GTFIGCIGGL VIIVLTIRAP VLTLMLCCLW AGICTWISSL VRVENSYAFG LAGYTALIII VTTGETPLLT PQFAVERCSE IVLGIVCAVM ADLLFSPRSI KQDIDRLVDK VLVDQYRLLQ LCIQPAEKSE IDRAWNELVK NTTSLNGMRS YLMMESSRWQ RCNRRLQVLH TESLALITQA CETYLVMSNH PEVISAELKT MLSEPAQTPA EIHQQMKKLR QFIAASHSEA IPHTISSWVG AATRYLLLSK GIQTNSSINQ VEEDILAGDA PVKPISAEGH HAMINGLRTG IATAIGGLFW LWTGWTSGAG CMVMIAVVTS LAMRTPNPRR MALDFLVGVI IALPIGALYF MFIIPSTQQS MLLLCISLGV LAFIIGIEVQ KRRLGSLGTL ASTINIIVLS NPMIFNVRQF LDSALGQIVG CFVSLIVLLL IRDNAKDRTG RTLLNRFVYS AVSALTTNKT KRGENHLPAL YQQLNQLLMM FPADIDKYRL ALTLIIAHQR LNRTEIPVNA ELSAFHKQIR STAERVITVN NDQKRRYYFA RLLQELDQYQ QKLVDYQAAD AVIRPVKRLT EMLRKYQSAL I
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