| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0395 |
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| Symbol | |
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| ID | 6089853 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | + |
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| Start bp | 429095 |
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| End bp | 431698 |
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| Gene Length | 2604 bp |
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| Protein Length | 867 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 641595459 |
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| Product | type VI secretion ATPase |
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| Protein accession | YP_001719153 |
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| Protein GI | 170022648 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0542] ATPases with chaperone activity, ATP-binding subunit |
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| TIGRFAM ID | [TIGR03345] type VI secretion ATPase, ClpV1 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATTCAAA TTGACTTGCC CACACTCGTA AACCGCCTTA ATCCCATTGC CCGCCATTCT
CTGGAAGCGG CGGCGGCGCA TTGCGTCAGT CAGCAGGAAG CTGAAATTAC GGTCTCCCAA
GTGCTACTGC AAATGATCTC CACACCATTA TGTGATGTCA GGTTAATCCT GAGCCATGCG
GGTGTTGAGG AGGATGAACT ACGGGAGTCG CTCGATCAAC GTGTTTCAGG CTATCAAGCT
ATTACCCAGG CCTACCCGAG TTTTTCCCCA TTACTGGTGG AATGGTTACA AGACAGTTGG
TTGCTGGCAT CGACAGAGAT GGAACACAGC CAACTCCGTA GCGGCGTGAT GTTATTGACG
TTATTGCTCA GCCCGTCGCG CTATCTGGTC CCCACGGCCA ACCGGCTACT GTCCCCGATT
AACCGTGAGT TACTGCGTCA GAATTTTGCT AACTGGACGG CAGACTCAGC AGAAACACCG
CGAGCAGAAA AAGGGGCTGA AGCTGGCAAC GGCGCAGAAA TCAATGGTGA CAGCTTGCTG
GCCCGCTATG CCAGCAATAT GACCGAACAG GCCCGTAACG GCGAATTAGA CCCTGTGCTG
TGTCGGGATA CCGAAATTGA TCTGATGATC GATATTCTGT GCCGCCGCCG CAAAAATAAC
CCGATAGTGG TGGGTGAAGC GGGGGTAGGG AAAAGTGCGC TGATCGAAGG TTTAGCCCTG
CGTATCGTGG ATAATCAGGT GCCAGAAAAA CTGCGTAACA GCGAGTTGAT GACGCTGGAT
TTAGGCGCGC TTCAGGCTGG TGCGGCAGTG AAAGGCGAAT TTGAGAAGCG TTTCAAGGGC
ATCATGGCGG AAATTGCGCA GTCCACGACG CCAATTATCC TGTTTATTGA TGAAGCACAC
ACGCTGATCG GGGCCGGTAA CCAACAGGGC GGATTAGACA TTTCCAATCT GCTCAAACCC
GCTTTAGCGC GTGGTGAACT GAAAACGATT GCGGCAACCA CCTGGAGCGA ATACAAAAAA
TACTTTGAAA AAGATGCTGC GCTGTCGCGC CGTTTCCAGT TGGTCAAAGT TTCTGAACCC
AGCGCGCAAG AGGCCACGAT TATCATGCGT GGCCTACGTA CAGTTTATGA ACAGGCGCAT
GGCGTCCTGA TCGATGATGA AGCATTGCAA GCTGCGGCGG TGCTCAGTGA CCGCTATATT
TCAGGGCGGC AGTTGCCAGA TAAAGCCATC GACGTGTTAG ATACCGCAGC CGCACGTGTT
GCCATCAATC TCACCTCTGC ACCGCGTCAG GTTTCGGCAC TGAAAAACGA ACTCTACCAT
CAGGGGATGG AAATCGAGAT GCTGGAGCGG GAGCAACGCC TCAGCTTAAG CCGCCCGGAT
GAGCGGTTAT CCGTTTTACA ACAGCAGCGA ATTGAGATCG AACAGCAACT CATTGCCCTG
AATACCGGTT GGGAAAAGCA ACAACATTTG GTCCAGCAGA TTATCGCACT GAGAGCGGTC
CTGTTGGCAC AAGAAGAGAG CGCCACAGAT GAGCAAGTGG TCAATCTGAC AGCGCTGAGC
GATGAGTTGG AACGGTTGCA ACAGCACCAG ACGCTGGTCT CGCCCCATGT GGATAAGAGC
CAGATTGCGG CGGTGATCGC GGAATGGACC GGTGTACCGC TAAACCGCCT TTCTCAGAGT
GAATTGGCAG TGGTCACTGA ATTGCCCTCT TATCTGGGGC AGCAGATCAA AGGACAAGAG
ACGGCTATCC ATTGCTTGCA CCAACACTTG CTGACCGCAA GGGCGGATTT ACGTCGCCCA
GGTCGCCCAA TGGGGGCTTT CCTGTTGGTT GGGCCTAGCG GCGTGGGTAA AACGGAAACC
GTGCTACAGA TTGCCGACCT GCTCTATGGT GGCCGCCAAT ATCTCACCAC CATCAATATG
TCCGAATTCC AAGAGAAGCA TACCGTCTCG CGCCTGATTG GTTCACCTCC GGGCTACGTC
GGGTATGGTG AAGGCGGCGT ACTGACCGAA GCTATTCGTC AAAAACCTTA CTCGGTAGTG
CTACTGGATG AAGTGGAAAA AGCCCACCCC GATGTGCTGA ATCTGTTTTA TCAGGCCTTC
GATAAGGGCG AGTTGGCGGA CGGTGAAGGC CGCATCATCG ATTGCAAAAA TATCGTATTT
TTCCTGACCT CCAATCTGGG ATACCAGACC ATTGTTGATC ATGCAGACGA GCCTGCATTG
CTCAATGAAC GGCTCTACCC CGAGCTATCG GCATTCTTTA AACCTGCGCT ACTGGCCCGC
ATGGAAGTGG TTCCTTATCT GTCGCTGGGC ATGGAAACGC TGCAAATTAT CATTCACGGC
AAACTGAACC GTCTGGATAC GCTGCTGCGC CAACGCTTTA GTGCTGATGT GGTCATTGAA
CCTGAAGTGA TCGACGAAAT CCTGCTACGC GCGACCCGTG CCGAAAATGG TGCGCGTATG
CTCGAGTCGA TTATCGACGG TGCGCTATTA CCACCGGTTT CTCTGTTGTT ATTACAGAAA
GTGGCCGCTG GCACCGCTAT CAGCCACATT CGGATCGCGG TAGAGGGGAA TGTGTTTACT
GCACAGGTTG AGGGAGCGAT ATGA
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| Protein sequence | MIQIDLPTLV NRLNPIARHS LEAAAAHCVS QQEAEITVSQ VLLQMISTPL CDVRLILSHA
GVEEDELRES LDQRVSGYQA ITQAYPSFSP LLVEWLQDSW LLASTEMEHS QLRSGVMLLT
LLLSPSRYLV PTANRLLSPI NRELLRQNFA NWTADSAETP RAEKGAEAGN GAEINGDSLL
ARYASNMTEQ ARNGELDPVL CRDTEIDLMI DILCRRRKNN PIVVGEAGVG KSALIEGLAL
RIVDNQVPEK LRNSELMTLD LGALQAGAAV KGEFEKRFKG IMAEIAQSTT PIILFIDEAH
TLIGAGNQQG GLDISNLLKP ALARGELKTI AATTWSEYKK YFEKDAALSR RFQLVKVSEP
SAQEATIIMR GLRTVYEQAH GVLIDDEALQ AAAVLSDRYI SGRQLPDKAI DVLDTAAARV
AINLTSAPRQ VSALKNELYH QGMEIEMLER EQRLSLSRPD ERLSVLQQQR IEIEQQLIAL
NTGWEKQQHL VQQIIALRAV LLAQEESATD EQVVNLTALS DELERLQQHQ TLVSPHVDKS
QIAAVIAEWT GVPLNRLSQS ELAVVTELPS YLGQQIKGQE TAIHCLHQHL LTARADLRRP
GRPMGAFLLV GPSGVGKTET VLQIADLLYG GRQYLTTINM SEFQEKHTVS RLIGSPPGYV
GYGEGGVLTE AIRQKPYSVV LLDEVEKAHP DVLNLFYQAF DKGELADGEG RIIDCKNIVF
FLTSNLGYQT IVDHADEPAL LNERLYPELS AFFKPALLAR MEVVPYLSLG METLQIIIHG
KLNRLDTLLR QRFSADVVIE PEVIDEILLR ATRAENGARM LESIIDGALL PPVSLLLLQK
VAAGTAISHI RIAVEGNVFT AQVEGAI
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