| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YPK_0048 |
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| Symbol | |
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| ID | 6090976 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis YPIII |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010465 |
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| Strand | - |
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| Start bp | 51682 |
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| End bp | 52911 |
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| Gene Length | 1230 bp |
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| Protein Length | 409 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 641595107 |
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| Product | major facilitator transporter |
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| Protein accession | YP_001718815 |
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| Protein GI | 170022310 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 0.848234 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAAACTT CATTTTCACC CGCGACACGC TTAGGTCGAC GGGCGCTTTT ATTCCCTCTC
TGCTTAGTAT TGTTCGAATT TGCAGCGTAT ATCGCCAACG ATATGATCCA GCCAGGTATG
CTGGCAGTGG TCGCCGAGTT TAATGCCAGT GTCGAGTGGG TTCCAACCTC TATGACCGCT
TATCTGGCGG GGGGGATGTT CCTACAATGG CTTCTAGGGC CGTTGTCTGA CCGCCGTGGG
CGTCGTCCAG TGATGTTGGC TGGGGTCGCT TTCTTTGTCG TGACTTGCCT TGCCATTTTA
CTGGTTAATA GCATTGAACA GTTCATCGCA ATGCGCTTCT TGCAAGGCAT TGGCTTGTGC
TTTATCGGTG CCGTCGGTTA CGCCACTATT CAGGAATCTT TTGAAGAAGC GGTCTGTATT
AAAATCACCG CGTTAATGGC CAATGTGGCA TTGATTGCTC CGTTGCTTGG CCCATTGGCC
GGTGCTGCCC TGATCCATGT GGCTCCTTGG CAAACCATGT TCGTCTTGTT TGCAGTGCTG
GGGGCAATTT CATTTGCCGG CCTGTGGCGC GCGATGCCAG AAACTGCTTC GCTGAAAGGG
GAGAAACTGT CAGTTGCCAA CATGTGGCAT GATTATAAGC AAGTACTTGC TAACCGCCGC
TTCCTCTGTG GTTCTTTAGC ATTGGGCTTT GCCAGCCTGC CTTTGCTGGC ATGGATTGCC
CAGTCACCGG TAATTTTGAT CAGCGGAGAG CAACTCTCTA CTTTTGAATA TGGCATTTTG
CAGGTACCAA TTTTCGGCGC ACTGATTATA GGTAACCTGA CACTGGCACG ATTGAGCGGT
AAAACCAGCA TTCCTCAACT CATCCGTTAC GGCGCTGGCC CAATGATTGT TGGCCTGATG
ATCGCCGCCG GTTCAACACT CTATTCATCC CATGCCTATC TGTGGATGAC CGCCGGGTTG
AGCCTGTATG CTTTTGGTAT CGGTCTGGCG AACGCCGGTC TGGTGCGGTT GACACTATTC
GCCAGTGATA TCAGTAAAGG AACCGTCTCT GCGGCCATGG GGATGATTAG CATGATGATC
TTCACCTTAG GTATTGAGTT GGCCAAAGTG GCTTACCTGT GGGGCGACAG TAGAGGGTTT
AATCTGTTTA ACCTGATGAG CGGTTTACTG TGGCTAGGCT TGGTGATGGT GTTCATCCGC
CGCCAACCCG AGGCGGTTGC TACCGAGTAA
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| Protein sequence | MQTSFSPATR LGRRALLFPL CLVLFEFAAY IANDMIQPGM LAVVAEFNAS VEWVPTSMTA
YLAGGMFLQW LLGPLSDRRG RRPVMLAGVA FFVVTCLAIL LVNSIEQFIA MRFLQGIGLC
FIGAVGYATI QESFEEAVCI KITALMANVA LIAPLLGPLA GAALIHVAPW QTMFVLFAVL
GAISFAGLWR AMPETASLKG EKLSVANMWH DYKQVLANRR FLCGSLALGF ASLPLLAWIA
QSPVILISGE QLSTFEYGIL QVPIFGALII GNLTLARLSG KTSIPQLIRY GAGPMIVGLM
IAAGSTLYSS HAYLWMTAGL SLYAFGIGLA NAGLVRLTLF ASDISKGTVS AAMGMISMMI
FTLGIELAKV AYLWGDSRGF NLFNLMSGLL WLGLVMVFIR RQPEAVATE
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