Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Xfasm12_2278 |
Symbol | |
ID | 6120042 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Xylella fastidiosa M12 |
Kingdom | Bacteria |
Replicon accession | NC_010513 |
Strand | + |
Start bp | 2419606 |
End bp | 2421090 |
Gene Length | 1485 bp |
Protein Length | 494 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 641650216 |
Product | hypothetical protein |
Protein accession | YP_001776756 |
Protein GI | 170731323 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGGACCATG CCACCCTGAC CACCTTGCGT GAGCGGCACC CCGCCTGGCG GTTACTGACC TCACCGCATG CACCCCTGGT CACAAGCTTT CTGCACCGCG TGTTCGTCGC AACGAACGCG CGCCTGCTGA GCGAGACCAA GATCACCCAG GCACTGGAAG ACACGCTGTA TGCGCTGCGT GAACACGAAG GACCGGAGGC CTACCCGAAG GGCGCCCTGG ACTACCTCAA TGACTGGGCC GCACCCGACA AAGGCTGGCT ACGCAAGTTC TACACCTCAG GCACGGATGA AGCGCAGTTC GACCTCACCC CGGCCACTGA AAAAGCCATC CTCTGGCTGC TGTCACTCAC TGAACACACA TTTGTTGGCA CCGAATCGCG CTTGCTGACA CTGTTTGCGC TGCTGGAACA AATGAGCACC GGTACCGAGA CAGACCCAAT CAAGCGCCTG GACGAACTGC GCAAGAAGCG CGACGCACTG GACATCGAAA TCACCCGCGT CCTGGAAGGG CATACACCGC TGCTGGACGA CACCGCGATC AAAGACCGCT TCCAGCAATT CCAGCAACTG GCGCGTGAGC TGCTGTCCGA CTTCCGCCAA GTGCAAGACA ACTTCCGCCA GCTCGACCGC AAGGTACGCG AGAAAATCGC ACTGTGGGAA GGCACCAAGG GCACGCTGCT CGACGAAATC ATGGGCGAGC GCGATGCCAT CAGCGATTCT GACCAGGGCC GCAGCTTCCG CGCCTTCTGG AACTTCCTGC TCTCCAGCCG ACGTCGCGAG GAACTTTCCG AGCGGCTGGG CCAGGTACTG GCGCTGCCCG CGGTGGCGGC GCTGCATCCG GAGCCGCGTA CCCGTCGCAT CCACGACGAC TGGATAGAAG CCGGCGAACA AACCCTGCGC ACCATCAGCC AACTATCGCA GCAATTACGC CACTTTGTGG AAAGCCGAGC TTTTCTGGAG AACCGCCGCA TTATGGACCT GCTACACGGC ATTGAGCGCA AAGCACTCGG CCTGCGCGAC ATGACACCCT CTGGCACAGT GATGTACCTG GATGCGATCG GGGCGGACAT TCAACTGCCG CTGGAGCGCC CCTTATTCAC CCCACGCGCA AAGCCGCGCC TGGCTGATCT GGTCCTTGCG GCCGGTACAG ACGACATCGA CACCACCCCC TTGTTTAACC AAATTGTGAT GGACAAAGCA CGCCTGCGCT TAGCCATCCA ACGCGCACTG CGCACCCAAT CCCAGATCTC CCTGCGCACC CTGTTGCAAA CCGAGCCACT GCAACAGGGT TTGGCCGAAC TGGTCGCCTA CCTGGAGCTG GCCCACACCA GCAACAGCAG TGATCCGGAC GGCTTGCGCG GCATCGTCGA CGAAACGGTA GAAGAGCCGA TCCGCTGGCA GGCCAACAAT ACAGTGGGTG AAACAGTCAC CCGCGAGGCA CGCTTACCCC GCATCATCTT CACGCGGCGT GCCCCCTCGC ACTAG
|
Protein sequence | MDHATLTTLR ERHPAWRLLT SPHAPLVTSF LHRVFVATNA RLLSETKITQ ALEDTLYALR EHEGPEAYPK GALDYLNDWA APDKGWLRKF YTSGTDEAQF DLTPATEKAI LWLLSLTEHT FVGTESRLLT LFALLEQMST GTETDPIKRL DELRKKRDAL DIEITRVLEG HTPLLDDTAI KDRFQQFQQL ARELLSDFRQ VQDNFRQLDR KVREKIALWE GTKGTLLDEI MGERDAISDS DQGRSFRAFW NFLLSSRRRE ELSERLGQVL ALPAVAALHP EPRTRRIHDD WIEAGEQTLR TISQLSQQLR HFVESRAFLE NRRIMDLLHG IERKALGLRD MTPSGTVMYL DAIGADIQLP LERPLFTPRA KPRLADLVLA AGTDDIDTTP LFNQIVMDKA RLRLAIQRAL RTQSQISLRT LLQTEPLQQG LAELVAYLEL AHTSNSSDPD GLRGIVDETV EEPIRWQANN TVGETVTREA RLPRIIFTRR APSH
|
| |