| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Xfasm12_2126 |
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| Symbol | |
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| ID | 6120096 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Xylella fastidiosa M12 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010513 |
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| Strand | - |
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| Start bp | 2232561 |
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| End bp | 2233511 |
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| Gene Length | 951 bp |
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| Protein Length | 316 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 641650067 |
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| Product | lysine--tRNA ligase |
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| Protein accession | YP_001776613 |
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| Protein GI | 170731180 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2269] Truncated, possibly inactive, lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00462] lysyl-tRNA synthetase-like protein GenX |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.840396 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCCTCA TCGACACCTT GCGGCTGCGC GCCCGTTTAA ACACCATGAT CCGGCGCTTC
TTTGCAGATC GCGGCGTCTT AGAAGTTGAA ACACCCCTCC TCTCCGCCGC CGGAAATACC
GAGCCAAACA TCCACAGCTT CACCACCTGC TTTACTGGGC ATTGTGATGC CGGAGCAGCA
CAACGTTGGC TGCGTACTTC GCCGGAATAC CCCCTGAAAC GTCTCCTTGC TGCTGGTATC
GGCGACTGCT ACGAACTGGG GCGCGTCTTC CGTAACGGAG AAGCGGGCGG TCGCCATAAC
CCCGAATTCA CCATGCTAGA GTGGTATCGC GTCGGCTGGG ATCACCACCG CCTGGCTGAG
GAAACCACCG CCTTGGTCCG TGAAGCGCTG GCTCTTGTCG AACGCACAGC TACATTGCAT
GTCACCACGT ACCGTCAACT GTTCCTTGAC ATCCTTGATA TTGATCCCCT GTTTGCTCCG
CAAACCGTAC TGCGTCAAGC CTTGGACGGT GGCGAGATCA ACCCCGATGG ATTGAGCCGT
GATGATTGGC TTGACCTACT GATGACGCAC CGCATCCAGT CGACATTCCC TACCGACCGC
ATCACCGTCA TTGACGACTG GCCAGCCACA CAGTGTGCCT TGGCGCGTAT CCGTTCCGAT
GACCCCCCGG TGGCGGAGCG CTTTGAACTC TACTTAGGCG TTCACGAGAT CGCCAACGGT
TACCATGAAT TGAACGACGC AACTGAACAG CGCCGTCGTT TTGAACACGA TAATCAAGTC
CGTGCCGCAC GCGGATTGCC GCAGATGCCT CTTGACGAAC CTCTCTTGAA CGTCTTGTCC
CGTCTTCCTG ATTGCGCCGG TGTCGCCGTC GGTGTGGATC GATTACTGAT GGCCATGAGC
GCAACCGCAT CCATTGCCGA CGTCCTGGCG TTTTCCTTTA TCTCTGCTTA G
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| Protein sequence | MTLIDTLRLR ARLNTMIRRF FADRGVLEVE TPLLSAAGNT EPNIHSFTTC FTGHCDAGAA
QRWLRTSPEY PLKRLLAAGI GDCYELGRVF RNGEAGGRHN PEFTMLEWYR VGWDHHRLAE
ETTALVREAL ALVERTATLH VTTYRQLFLD ILDIDPLFAP QTVLRQALDG GEINPDGLSR
DDWLDLLMTH RIQSTFPTDR ITVIDDWPAT QCALARIRSD DPPVAERFEL YLGVHEIANG
YHELNDATEQ RRRFEHDNQV RAARGLPQMP LDEPLLNVLS RLPDCAGVAV GVDRLLMAMS
ATASIADVLA FSFISA
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